Burkholderia cenocepacia DWS 37E-2: DM40_5411
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Entry
DM40_5411 CDS
T03488
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Module
bcew_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcew03000
]
DM40_5411
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bcew01504
]
DM40_5411
Transcription factors [BR:
bcew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM40_5411
Antimicrobial resistance genes [BR:
bcew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DM40_5411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_8
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AIO37366
LinkDB
All DBs
Position
3:complement(453428..454444)
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AA seq
338 aa
AA seq
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MDRTLHAMSVFSHVARLGSFTAAADMLGISAASASTLVRRLEEYLGVTLLQRSTRCVRLT
AEGEQYQEHCQRILGEIELMQQQLSGAGKVARGRLAVDLDQEVAHSVLPFLPVFRANHPE
VGLRVDVGGDADGLIANGVDCAVVVGQLADSSLRSRRVGQFHAVTVASPDYLKARGTPVD
PDGLHCHDVIHYTPRRFGPVREFRYTVDGAETRLKLAERISVNDVRSAVRYAVEGVGIAQ
VSERMVAEELATGALVSILGEYGPPPLPISVLYPDRRQVPMSIRAFIDWMQTQLRDLEIA
SFDHTSAPNGRRDAAPYWTPNSERPFITAGFQQLSATA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaccctgcacgcgatgtcagtgtttagtcacgtcgcccgcctcggcagtttc
accgcagcggctgatatgctcggtatcagtgcagcgtcggccagcacgctggttcgcaga
ctggaagaatatctcggcgtcacgttgcttcagcgatcgacccgctgtgtcaggctcact
gcggagggcgagcagtatcaggagcactgccagcgcattctcggcgagatcgaactgatg
cagcagcaactgagcggcgcggggaaggtcgcgcgcggccggttggcggtggatctcgat
caggaagtcgcgcattcggtgttgccgttcctgccggtgttccgtgcgaaccatccggaa
gtgggcttgcgcgtcgacgtcggcggcgacgcggacggcctgattgcgaacggcgtggac
tgcgcggtcgtggtcggccagttggcggactcgtcgctgcgcagccgtcgcgtcgggcag
ttccatgcggtgacggtggcgagccccgactatctgaaagcgcgcggcacgccggtcgat
cccgacggcctccattgccacgacgttattcattacacgccgcggcgcttcggtccggtc
cgcgagttccgttacaccgtggacggcgccgagacgcggctcaagctggccgagcggatt
tccgtcaacgatgtgcgttcggccgttcgatatgcggtcgaaggcgtcggcatcgcgcag
gtgagcgaacggatggtcgcggaagagttggcgacgggcgcgctcgtcagcattctcggc
gagtacggcccgccgccgctgccgatttcggtgctgtatccggatcgacgtcaggtgccg
atgtcgatacgcgcgttcatcgactggatgcagacccagcttcgcgatctggaaatcgcc
agcttcgaccatacgtcggcgccgaacggcaggcgcgacgcggcaccgtactggacgccg
aacagcgagcggccgttcattacagcgggcttccagcagctgtcggccacggcgtga
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