Bacillus cereus F837/76: bcf_06160
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Entry
bcf_06160 CDS
T01703
Name
(GenBank) putative ATP-dependent DNA helicase YjcD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcf
Bacillus cereus F837/76
Pathway
bcf03420
Nucleotide excision repair
bcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bcf_06160
03430 Mismatch repair
bcf_06160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcf03400
]
bcf_06160
Enzymes [BR:
bcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bcf_06160
DNA repair and recombination proteins [BR:
bcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bcf_06160
MMR (mismatch excision repair)
Other MMR factors
bcf_06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DUF2972
Motif
Other DBs
NCBI-ProteinID:
AEW54355
LinkDB
All DBs
Position
complement(1171551..1173617)
Genome browser
AA seq
688 aa
AA seq
DB search
MTQEKFSQKSLTHADIPRATYHIPKTSTHLIMEEDADAAYFRALEQQNVFLNEKQLEAVR
TTEGPVLTLAGAGSGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRNRVANLPG
MNHAASSYVVAGTFHSVFLKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDDYDAETI
LAMISLEKNKLNRPKDVKAKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENN
APLLTQLQQRFHYIEVDEFQDTSYAQYEIVKLLASPRNNLFIAGDDDQAIYGWRGASHQI
ILSFPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP
ATTLDEANQILQLIQEKVDSGERNYKDFCLLYRTHSVSRSLLDQLTIHKIPFIKHGASQS
FYEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISFIEREQWKYGEGRFPSLL
HFLLLNPSLKPFQVKKVNERIDFIKFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTM
HKDIQEEMLEELMESANRFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAK
GLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEALEEERRLLYVAITRAKEELYISSP
QFFRGKKLDISRFLYTVRKDLPEKTSTK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaaaattttcacaaaaatcattaacgcacgctgatattccacgtgcaaca
tatcatattccgaaaacatctacccatttaattatggaagaagatgcagatgcagcgtat
tttcgcgctctcgaacagcaaaatgtatttttaaacgaaaaacaattagaagccgtacga
acgacagaaggtcctgttcttacactggctggtgccggaagcgggaaaacatctgtttta
acaactcgcgtaggttatttagtaaatgtaaaacaagttcatccgcgaaatattttatta
cttacatttacacaaaaagcggctgaagaaattcgaaatcgcgtagccaatttaccaggt
atgaatcatgcggcaagtagctatgttgttgccggtacgttccactctgtctttttaaaa
ttgcttcgtagtcaaggatataatcagcaaattttagcaaacgaaaaacataaacaaatt
atgataaagaaaattttaaaagaattgcgtttaaaagacgattatgatgctgaaacgata
ctcgcaatgatttcacttgagaaaaacaagttgaatcgcccgaaagatgtaaaagcaaaa
acacccgttgaacaagaatttaaagaagtatacgagcgttttgaggaagtgaaacaacga
tataactatatcgatttcgatgacatcttattagaaacatattatatgttagaaaataat
gctcctttacttacccaattacaacaacgttttcactatattgaagtagatgagttccaa
gatacatcgtatgcacaatatgaaattgtaaaattgttagcttcgccaagaaataatttg
tttatcgcaggtgatgacgatcaggcgatatatggctggcgaggagcaagtcaccaaatt
attttatctttcccaaaagaatttgataacactacaattattgcacttaatacgaattat
cgatccaacccttttattgtcggacttggaaatgaagttatcaaactaaatcaagagcgt
tttgataaagagctatattctgtacgcgaagaaggtgtacaacctttttacgcaagaccg
gctacgactcttgatgaagcaaaccaaattttgcagctcattcaagaaaaggtagatagc
ggtgaacgaaactataaagatttttgtttactataccgcacacattctgtaagccgttcg
ttacttgatcagcttaccattcataaaatcccgttcattaagcacggcgcgagtcagtca
ttttatgaacattctttaattaagcctgtattagatcatttacgactcgtaattgagccg
tttcgattagaatcactttcaaatatattgccaacgatgtatatcgggcgtgatgattgt
atttcatttattgaacgtgaacaatggaaatatggtgaaggtcgttttccttctcttctt
catttcttattattaaatccaagcttaaaaccttttcaagtgaaaaaggtaaatgagcgt
atcgattttattaaatttataaaagaattagaaccgaaaaaagctttaaaagaaattatt
catggtaaaggaaagtatttagagtacttacaaagtaacgatcgttcttcctttacgatg
cataaagatatacaagaagaaatgttagaagaattaatggagtcggcaaatcgtttcacc
gacattccagcttatttacaatttattgatgaagccattcaagggcaaaaagaaatggaa
gcattaaaaacaatgccgcaaaaagatgctgtttcgcttatgtctattcataacgcaaaa
ggtcttgaatttccatgcgtctttttacttggagcgagcgatggtattctgccccacacg
tcttctttaaaagatgcaaatgatcgtgttacagagacttctgaagctttagaagaagaa
cgccgactactttatgtcgcgattacacgggcgaaagaagaactgtacatttcctctccg
caattttttagaggaaaaaaattagacatatctcgttttttatacactgtgcgaaaagat
ttacctgaaaagacatccactaaataa
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