Bacillus cereus F837/76: bcf_14640
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Entry
bcf_14640 CDS
T01703
Name
(GenBank) Hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bcf
Bacillus cereus F837/76
Brite
KEGG Orthology (KO) [BR:
bcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcf03016
]
bcf_14640
Enzymes [BR:
bcf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
bcf_14640
Transfer RNA biogenesis [BR:
bcf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
bcf_14640
Prokaryotic type
tRNA splicing ligases
bcf_14640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
SpoIISA_toxin
DUF6922
Motif
Other DBs
NCBI-ProteinID:
AEW56050
LinkDB
All DBs
Position
complement(2750051..2751238)
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AA seq
395 aa
AA seq
DB search
MLKLQGKYNEAKIFTNNVDETAIGQIVDLCNQEFVKDSQIRIMPDTHAGAGCTIGTTMTI
QDKIVPNLVGVDIGCGMEVVVIDKKKEEINFDYLDETIRKFVPSGFRIRDKEHRFSKMID
FDGVRAPFTLQRAQKSIGTLGGGNHFVELNEDDKGNVYIVIHSGSRNLGKQIAEYYQNFA
YEQLIDVTSIKDDIIKRLTEEGRAKEIQETLRGIQKPKICKELAYLEGQGFKDYMNDMNI
AQKYAALNRKAMIDEIVTKMDWKITDQFTTIHNYIDIENMILRKGAISAQKDERVIIPIN
MRDGSIIAFGKGNPDWNFSGPHGAGRIMSRKKAKESLSLEEFQNTMIEVWTTSVVESTID
EAPMVYKPMDEIIENTKETIDIKHIIKPLYNFKAN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattacaaggaaaatacaatgaagcgaaaatttttacaaataacgttgatgag
actgcgatagggcagattgttgatctttgtaaccaagaatttgtaaaggatagtcaaatt
cgtattatgccagatacacatgcaggagcaggttgtacgattgggacaacaatgacaata
caagataaaattgttcctaatcttgtaggggtagatattgggtgtgggatggaagttgtt
gtaattgataagaaaaaagaagaaattaatttcgattacttagacgaaacaattcgtaaa
ttcgttccaagtggttttcgtatacgagataaagaacatcgattctcaaaaatgattgat
tttgatggtgtgagagctccatttacattacaacgcgctcaaaaaagtattggtacactt
gggggaggaaatcattttgtcgaattgaatgaggacgataaaggtaatgtttatattgtc
attcatagtggttcgcgtaatttaggtaagcaaattgcagagtattaccaaaacttcgca
tatgaacaacttattgatgttacatcaataaaagatgatattattaagaggttaactgaa
gagggaagagcaaaagaaatacaagaaactttacgtggaattcagaagccaaagatttgt
aaagaactagcttatttagaagggcaagggttcaaagattatatgaatgacatgaatatt
gcccaaaaatatgcggcgttaaatcgtaaagcaatgattgatgaaattgttacgaaaatg
gactggaaaattacagatcaatttactacaatacataactatattgacatagaaaatatg
attctacgaaaaggtgctatttcagctcagaaagatgaacgagtcattattccaattaac
atgagagatggttcaattattgcatttggtaaagggaatccagactggaatttttctggt
ccgcatggggcaggacgtatcatgagtcgtaagaaggctaaagaatcattgagtctagag
gaatttcaaaatacgatgatagaggtttggactacatcagtagtagaaagcacaattgac
gaggcaccaatggtatataagccaatggatgaaattatagaaaatacaaaagaaacgata
gatataaaacacattattaagccgttatataattttaaagcgaattag
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