Bacillus cereus F837/76: bcf_19760
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Entry
bcf_19760 CDS
T01703
Name
(GenBank) Ribonuclease J1 (endonuclease and 5' exonuclease)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bcf
Bacillus cereus F837/76
Pathway
bcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bcf_19760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcf03019
]
bcf_19760
Messenger RNA biogenesis [BR:
bcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bcf_19760
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AEW57073
LinkDB
All DBs
Position
3756799..3758466
Genome browser
AA seq
555 aa
AA seq
DB search
MKFLKNDQAAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVGEPADLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMDNGD
VLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKV
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaagaatgatcaagcagccgtttttgctttaggtggccttggtgaaatc
ggtaaaaatacatatgctgttcaatttcaagatgaaattattataattgacgctggaatt
aaatttccagaagacgaactcctcggaatcgattatgtaataccagattacacttatttt
gtgcgaaacgaagataaaattaaaggattattcattacacatggtcacgaagatcatatc
ggtggaattccttacttattacgtcaagtgaacattccgatttatggcggaaaattagca
attgcactaatcaaaaacaaattagaagagcacggattacttcgtaaagcaaaactttat
gaaattcaagaagatgatgttattaaatttaaaaagacatctgtttccttcttccgtaca
actcacagtatcccagattcatacggagttgttgtgaaaacacctcaaggacaagtggtt
catactggagatttcaaatttgatttcacaccagttggtgaaccagcggacttaacaaaa
atggctgaaatcggaaaagacggtgtactttgtctcttatctgacagtacaaacagtgaa
gttccaaactttacaatgtctgagcgccgtgttggtgatagtattcaagatattttccgc
aaagtagaaggtcgtattatcttcgcaacctttgcatcaaatatccatcgcttgcaacaa
gttgttgaagccgctgttgaaaacaatcgcaaagtggctgtatttggccgcagtatggaa
gcagcaattgaaatcggacaaaacctcggttatattcgctgtccgaaagatacattcata
gatgcgtctcaactaaaccgcctaccggctaataaagttgttattttatgtacaggtagt
caaggggagccaatggcagcactttcacgtattgctaatggtactcatcgtcaaattcaa
atcattcctggcgacacagttgtcttctcttcttcaccaatccctggtaatacaattagc
gtaagccgtacaattaacatgttgtaccgtgctggtgctgatgtaatccacggaaaactg
tcaaacattcatacgagtggacatggcggacaagaagaacaaaaactaatgcttcgtcta
attaaaccgaagtatttcatgccaattcacggtgaatatcgtatgcaacgtatgcatatg
aaattagcaaatgattgtggtattccagaagaaaactgtttcatcatggataatggagat
gttcttgccttacgttctgatgaagcaagtgtagctggtaaaataccatctggatctgtc
tatattgacggaaatggtattggagatatcggtaatatcgtattacgcgatcgtcgtatc
ctttctgaagaaggacttgttattgtagttgtaagcattgatatgaaagaatttaaagtt
gcagcagggcctgatattatctcacgcggtttcgtttatatgcgcgaaagtagtgattta
attaatgatgcgcaaacattaattacaactcatttagaaaaagtaatggaacgtaaaaca
acacaatggtctgaaattaaaaatgaaattacagacacattagcaccattcctatatgag
aaaacgaaacgtcgcccaatgattttaccaatcattatggaaatataa
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