Bacillus cereus F837/76: bcf_21925
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Entry
bcf_21925 CDS
T01703
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcf
Bacillus cereus F837/76
Pathway
bcf03410
Base excision repair
bcf03430
Mismatch repair
bcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
bcf_21925
03430 Mismatch repair
bcf_21925
03440 Homologous recombination
bcf_21925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcf03400
]
bcf_21925
DNA repair and recombination proteins [BR:
bcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
bcf_21925
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
bcf_21925
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
bcf_21925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AEW57505
LinkDB
All DBs
Position
complement(4137120..4139459)
Genome browser
AA seq
779 aa
AA seq
DB search
MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP
FLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFT
EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL
SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVETNFPPEDNKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV
IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVL
HKFSLEDYKEHMMHASEVTELDEQYIVLLDLPKGTDELRDLFKVGFPSRIYTLFYQENNH
LFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatggcgagcgagtgagtgaa
ttagcaagtaaattacaattatcaccgcttgtcgtttcgttattcctcggtagaggacta
gatacagaagataagattttagattttttaaatacagaaaatcaagaatttcatgatcca
tttttattagaaggaatggatagaacggtagaacgtgtaaataaggcgattcaaaatgga
gagcaaatattaatatttggtgactacgatgcggacggagtaagtagtacgactgtatta
tatcttgccctacaagaattaggtgcagacgtagaattttatatcccaaaccgttttaca
gaaggttatggaccaaacgaagaagcattccgttgggcgcatagcgcaggattctcactt
attattactgttgatactggtatcgcagctgtacatgaagcgaaagtagcgaaggaactt
gggatagatcttattattacggatcaccatgagccgccaccagaattgccagaagcactt
gcgattattcatccgaaattagatggcggtgtgtatccgtttcactatttagcgggcgtt
ggtgttgcgtttaaagttgcgcatgcactactgggccgtgtaccagaacatttattagaa
attgcagtaattggtacagtagccgatttagtatcacttcacggtgaaaatagattgcta
gtgaagcgcggtttaaaacatatgcgcatgacgaaaaatattggactaaaggcgctattt
aaagtagctaacgtttcgcaaagtgaaattacagaagagagtattggcttctcaattgca
cctcgtattaatgcagttggacgtttagaagatgctacgccggctgtacatcttttatta
tcagaggatccggaagaagcgaaagagctggctgaagaaattgatgaactgaacaaactg
cgaaaagatattgtaaagcaaattacagaagaagctatcgctgaggtggaaacgaatttc
ccgcctgaagacaataaagtattagtgcttgcaaaagaaggatggaatccaggtgtaatt
ggaattgttgcttctaaattagttgaacgtttttatcgtccaacgattgtattatgcatt
gatcctgtaaaagaaactgcaaaaggttcagcgcgtagtattgcaggattcgatttgttt
gcaaacttgtcagattgtagagagttattgccacacttcgggggacatccgatggcagcg
ggaatgacgctacatatgaatgatgtagatgaattacgccgccgtttaaatgagcaagca
gaggtaattttaacggaagaagattttatcccaattacagctgtcgatgctttttgtaaa
gtggaggacgtaacacttgcagcaatcgaggatatgcaaaagttggcaccatttggtgtt
ggaaatccaaagccacgtattgcggtgaaggatgcagagttagaaagtattcgtgcaatc
ggatcagacggttctcatttaaaaatggctcttcgtgatggacaggcaacacttgataca
atcgggtttgggtttggagcgtacgcgaaagaaatttctccagttgcaaaggtatctgta
atcggggaagcgtctatcaatgaatggaataattttaagaagccgcaattaatggtgcaa
gatattgctgtagaggcatggcaattatttgattggcgtagtatgcgtaacgtagaagca
aatttagcagaacttccgaaagaaaaaataacgatggtgtatttttctaaagaggtattg
cataaattttctttagaagactataaagagcatatgatgcatgcatcagaagtaaccgag
ttagatgagcaatacatcgtgttacttgatttaccaaaaggaacagatgaattacgagat
ctatttaaagttgggttcccgtcgcgaatttatacgctattttatcaagagaataatcat
ttatttagtactgttccaacgagggatcactttaaatggtactattcattcttgagccaa
aaatcaccattttctttaagacaatatggagaacaactatgtcaacataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gatggcgtcatttttatggcagacaaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagaaaaagagttggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtaatcataaagaagtagaacagctagggtaa
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