Bacillus cereus F837/76: bcf_27380
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Entry
bcf_27380 CDS
T01703
Name
(GenBank) ATP-dependent RNA helicase YxiN
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcf
Bacillus cereus F837/76
Pathway
bcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bcf_27380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcf03019
]
bcf_27380
03009 Ribosome biogenesis [BR:
bcf03009
]
bcf_27380
Enzymes [BR:
bcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bcf_27380
Messenger RNA biogenesis [BR:
bcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bcf_27380
Ribosome biogenesis [BR:
bcf03009
]
Prokaryotic type
rRNA helicases
bcf_27380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEW58569
LinkDB
All DBs
Position
complement(5187505..5188950)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK
QKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT
MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIE
NPDSCIIFCRTQENVDHVYRQLNRVNYPCDKIHGGMVQEDRFGVMEDFRKGKFRYLVATD
VAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAY
IGFAIPKANAPSKEEVMKGKAAFEEKIQAKPTIKKDKSADINKGIMKLYFNGGKKKKIRA
VDFVGTIAKIQGVSAEDIGIITIQDNVSYVEILNGKGPLVLKVMRNTTIKGKQLKVHEAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagttttagtaattatgcattaagtaaagaagtaagacgagcacttact
ggtttaggatatgagcatccaacagaagtacaaggagaggttattccagttgcattacaa
aagaaggatcttgttgtaaagtcgcaaacaggaagtggaaaaacggcttcgttcggtata
ccactttgtgaaatggtagagtgggaagagaataaaccacaagcgttagttttaacacca
acgagagaacttgctgttcaagtgaaagaagatattacaaatatagggcgattcaaaaga
attaaagctgctgcaatttatggtaaatctccatttgcacgtcaaaaattagagttaaag
caaaagacgcatattgtagtaggaactccaggacgtgtgctagatcatattgaaaaaggg
actctttcattagaacgattaaaatatttagtgattgatgaagcagatgaaatgctaaac
atgggctttatcgaccaagtagaggcaattattgatgaattacctacaaaaagaatgaca
atgctattttcagcaaccttaccggaagatgttgaaaggttatcacgtacgtatatgaac
gcaccaactcatattgaaattaaagctgctgggattacaacagataaaattgaacatacc
ctttttgaagtgagggaagaagagaagttgtcacttcttaaagatgtaacaacaattgaa
aatccagacagttgcattattttttgtcgtacacaagaaaacgtagatcatgtatataga
cagctaaatcgagttaattacccttgcgataaaatacatggtggcatggtgcaagaagat
cgttttggggtgatggaagattttagaaaaggaaagttccgttatttagtagcaacggat
gtagctgcgagaggaattgatattgataatattacacatgttattaattatgatattcca
ttagagaaagaaagttatgtacaccgtacaggaagaacaggacgagctggtaatagcgga
aaggccatcacatttataacgccttatgaagatcgatttttagaagagattgaggcgtac
atcggttttgcaattccgaaggcaaacgccccttcaaaagaagaagttatgaaaggtaaa
gctgcatttgaagaaaaaatacaagctaaaccaactataaagaaggataaaagtgcggat
ataaataaaggaattatgaaattgtactttaatggcggaaagaaaaagaaaattagagcg
gtggattttgtcggtacaattgctaaaattcaaggtgtttctgctgaagatataggcatt
attacaatacaagataatgtttcgtatgttgaaatattaaatggaaaagggccacttgtt
ttaaaggttatgagaaatacgacgataaaaggtaaacaattgaaagtccatgaggcaaat
aagtaa
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