Bacillus cereus G9842: BCG9842_B5202
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Entry
BCG9842_B5202 CDS
T00815
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcg
Bacillus cereus G9842
Pathway
bcg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCG9842_B5202 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcg03021
]
BCG9842_B5202 (rpoC)
03400 DNA repair and recombination proteins [BR:
bcg03400
]
BCG9842_B5202 (rpoC)
Enzymes [BR:
bcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCG9842_B5202 (rpoC)
Transcription machinery [BR:
bcg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCG9842_B5202 (rpoC)
DNA repair and recombination proteins [BR:
bcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCG9842_B5202 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
EF-hand_STIM1
Motif
Other DBs
NCBI-ProteinID:
ACK95178
UniProt:
B7IT12
LinkDB
All DBs
Position
111729..115340
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGKGLAHNIKSAKRKIERVHPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEAILAYQNGYVHLHTRVAVA
ASSVNNVTFTEEQKGKLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAEYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFQITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVSENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLKGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDNMNVENDEVY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaactattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagtacgtcgtgaacgtatgggtcatattgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctactacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgcaactctgga
aatgaaccatcttggatgatcttagatgttctaccagtaatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttatatcgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacctaggtgctccaagcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggccgt
cgtggccgtccggttactggaccaggtaaccgcccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggc
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccagtgtggattaccgaaagaa
atggcgcttgaactgttcaaacctttcgttatgaaagagttagttggaaaaggcttagca
cacaatattaagagtgcgaaacgtaaaattgagcgtgtacaccctgaagtttgggacgtt
ttagaatctgtgattaaagagcatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacattagtagaaggtcgcgcaattcgtcttcatcca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggcggttcacgttccg
ttatcatcagaggcacaagcagaagctcgtattcttatgttagcggcacaaaacatcttg
aatccaaaagacggaaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggcgcaatcggtgaaggtatggtcttcaaagatgcaaac
gaagcaatacttgcataccaaaatggatatgtacatctgcacacacgtgttgcagttgct
gcaagttcagtaaataacgtaacgtttactgaagagcaaaagggtaagcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccgacaaactcaaaccttgaaaaagaaacaccagcggaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcaccatttagcaagaagatcctt
ggtaacatcattgcggaagtattcaaacgtttccaaattacggaaacatctcgcatgctt
gaccgtatgaaaaacttaggatttaagtactctacaaaggctggtattacagttggggta
tctgacattcttgtattaggtgaaaaagatgaaattctccatgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaacccaatcttcatgatgagtgattccggtgcccgtggtaacgcatcgaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtattatcgaa
cttccaattaaatcaagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcacttaaaactgccgattctggttactta
acgcgtcgtcttgtagacgttgcacaagatgtaattgtccgtgaagatgattgtggaaca
gatcgtggtctattaattggtgcgattaaagagggtaatgaagtaattgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttagtgaaaaccaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgttcacgtgtaacactcgccacggtgtatgtaag
aagtgttacggtcgtaacttagcaactggtacagacgtagaagtaggagaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaactccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattaca
gcagtgcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaagtaatggtacgccaaatgctacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgcgaaggtgttactgaaaggtaaacaaccagcgacagctagacctgttctactt
ggtattacaaaagcttcacttgaaacagattcgttcttatctgcagcttcgttccaagaa
acaactcgtgttttaacggatgcagcaattaaaggtaaacgcgatgagcttctaggattg
aaagagaatgttattatcggtaagcttgttcctgctggaacaggtatgaatcgttatcgt
aaagtggatcttgtaaaaacaacacaagataacatgaatgtagaaaacgatgaagtttat
gtggaacagtaa
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integrated database retrieval system
