Bacillus cereus G9842: BCG9842_B5280
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Entry
BCG9842_B5280 CDS
T00815
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bcg
Bacillus cereus G9842
Pathway
bcg03030
DNA replication
bcg03430
Mismatch repair
bcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCG9842_B5280 (holB)
03430 Mismatch repair
BCG9842_B5280 (holB)
03440 Homologous recombination
BCG9842_B5280 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcg03032
]
BCG9842_B5280 (holB)
03400 DNA repair and recombination proteins [BR:
bcg03400
]
BCG9842_B5280 (holB)
Enzymes [BR:
bcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCG9842_B5280 (holB)
DNA replication proteins [BR:
bcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCG9842_B5280 (holB)
DNA repair and recombination proteins [BR:
bcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCG9842_B5280 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
TIP49
Motif
Other DBs
NCBI-ProteinID:
ACK96102
UniProt:
B7ISU1
LinkDB
All DBs
Position
36433..37416
Genome browser
AA seq
327 aa
AA seq
DB search
MMKTWEQLSAIQPIGVKMLMNSIAKERISHAYLLEGGKGTGKFATAIQMAKSFLCSQRNG
VEPCHVCTNCKRIDSGNHPNLHIVKPDGLSIKKQQIHDLQEEFSKTGLEANKKLYIIEHA
DRMTANAANTLLKFLEEPSSDTTAILLTEQSHQILNTILSRCQVVTFRPLPTESLIRRLQ
EEGITASLSTLAAQLTNSFDEALALCSDEWFAQARALVIKLCEALEKDKTSIFFVQEKWG
KHFGEKEQLQQGLDMLLLIYKDLLYVQLGEEDRLVFHEQKEMFESFSYAQKRIVSALFNI
LEAKNRINANVNAQLVFEQLVLRLQEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgtgggagcagctttctgctatacaacccatcggtgtaaaaatgttgatg
aatagcattgcaaaagagcgtatatcccacgcttacttgttagagggagggaaaggtacg
ggaaagtttgcgacagcaattcaaatggcaaagagtttcctctgttctcagcggaatgga
gtagagccctgccatgtatgcacaaattgtaagcgaattgattcaggtaaccaccctaac
ttacatattgtaaaaccagacggattatctattaagaagcagcaaattcatgatttacaa
gaagagttttcaaaaacaggattagaggcaaataaaaaattatatattattgagcacgca
gatcgtatgacagcaaatgcggcaaatacacttttgaaatttttagaagaaccaagtagt
gatacaaccgctattttacttactgaacaaagtcatcaaattttaaatacgattttatct
cgctgccaagttgttacgtttagaccgttacctacggaatctttaattagaagattacag
gaagaaggtattacagcatctttatcgacacttgctgctcaactcacaaatagttttgat
gaagctttagctttatgtagtgatgaatggtttgcacaagcacgagctttagtgataaaa
ttatgtgaagcgctcgaaaaagataaaacctctattttttttgtacaagaaaaatgggga
aaacactttggagagaaagaacaattacaacaaggtttagatatgttactccttatttat
aaggatttactatatgttcaacttggagaagaagatcgtcttgtttttcatgagcagaaa
gagatgtttgaatcgttttcctatgctcagaagcgcattgtatcagctctctttaatata
ttagaggcaaaaaatagaatcaacgctaatgtaaatgcgcagcttgtgttcgaacagtta
gtgttgcggttgcaggagggatga
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