Burkholderia cenocepacia HI2424: Bcen2424_0112
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Entry
Bcen2424_0112 CDS
T00415
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bcen2424_0112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_0112
Enzymes [BR:
bch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcen2424_0112
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bcen2424_0112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
Zn-ribbon_GIR1
DUF5817
ADDB_N
DZR
Motif
Other DBs
NCBI-ProteinID:
ABK06866
LinkDB
All DBs
Position
1:115255..117516
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AA seq
753 aa
AA seq
DB search
MSGTYLRVALDHPLATLFDYRCDVQPAPVPGTLVQVPFGKRQAVGLVCEVTTHTDVPPSR
LRAVDAICTELPPLSADWLALVSFAADYYQRGRGEVALPALPQALRDAGRWGRLLAPEVR
YRPNEAGRAALPDALPARGAALRRLAQALVDTGSLTLPDARALHPKAAATLDDWAARGWV
DVEEIGWADAPVVNPVDNLSTGSGRAVPPALTDQQAEALDAIRAAQGFAPFLLHGVTGSG
KTEVYLHALASLLDARPDAQALVLVPEINLTPQFEAAFRARFAGALADDAIVTLHSGLAE
GERARNWLAAHTGRARIVLGTRLAVLASMPTLALIVVDEEHEPAYKQQEGLRYSARDLAV
WRAKQLGITVVLGSATPSLESWWQAEQGRYTRLTLSRRAVADATLPTVRLIDLEEERRRG
RASMGGLSGPLVAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK
PEHALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAEAVPGARILRIDADSTR
RKGSAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA
QLMQVSGRAGRAGLPGEVMVQTRYPRHALYHALGRQDYVGFANSTLAERRDAHLPPFVYQ
ALLRAEGRTLDAALAFLLQAAAALPGLPGADRVTVYDAVPMTIVKVANVHRAQLLLESAS
RAALQHALRAWQPELRALKGVLRWSVEVDPLDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacctacctgcgcgtggcgctcgaccatccgctcgcgaccctgttcgactat
cgctgcgacgtgcagccggcgcccgtgcccgggacgctcgtgcaagtgccgttcggcaag
cggcaggccgtcgggctcgtttgcgaagtcaccactcacaccgatgtcccgccgtcgcga
ctgcgcgcggtcgatgcgatctgtacggagctgccgccattgtcggcggactggctcgcg
ctcgtgtcgttcgccgccgactactatcagcgcgggcgcggcgaggtcgcgttgccggcg
ctgccgcaggcgctgcgcgacgccgggcgctgggggcggctgctcgccccggaagtgcgc
taccggccgaacgaagctggccgcgcggcgctgcccgatgcgttgcccgcgcgcggcgcc
gcgctgcgccggctcgcgcaggcgctggtcgataccggttcgctgacgctgcccgacgcg
cgcgcgctgcacccgaaggcggctgcgacgctcgacgactgggcggcgcgcggctgggtg
gacgtcgaggagatcggctgggccgatgcgcctgtggtcaaccctgtggataacctgtcg
acaggcagtggacgcgctgtgccgccggcgttgacggaccagcaggccgaggcgctcgac
gcgattcgcgcggcgcaaggcttcgcgccgttcctgctgcacggcgtgacgggcagtggc
aagaccgaggtctatctgcatgcgctcgcgtcgctgctcgacgcgcggccggatgcgcag
gcgctggtgctcgtgcccgaaatcaacctgacgccgcagttcgaggccgcgtttcgcgcg
cgcttcgcgggcgcgctcgccgacgacgcgatcgtcacgctgcacagcgggctcgccgaa
ggcgaacgggcgcgcaactggctcgccgcgcacacgggccgcgcgcgaatcgtgctcggc
acgcgtctcgcggtgctcgcgtcgatgccgacgctcgcgctgatcgtcgtcgacgaggag
cacgagcccgcgtacaagcagcaggaagggctgcgctattcggcgcgcgacctggccgtg
tggcgcgcgaagcagctcggcatcaccgtcgtgctcggctcggccacgccgtcgctcgaa
agctggtggcaggccgagcaggggcgttacacgcggctcacgctgtcgcgtcgcgcggtg
gccgacgcgacgctgccgaccgtgcggctgatcgatctcgaagaggaacggcggcgcggg
cgcgcgtcgatgggcgggctgtcggggccgctcgtcgcggcgctgaaggcgcggctcgaa
cgcggcgaacagagtctcgtgttcctgaaccggcgcggttacgcgccccagctcgcgtgc
gacgcatgcggctgggtggccggctgcccgcgttgcagcgcgtacgtcgtgctgcacaag
cccgagcatgcgctgcgctgccatcactgcggctgggaagcgcgcattccgcgttcgtgc
cccgagtgcggaaacgtcgacatcgcgccgctcgggcgcggcacgcagcgcatcgaggag
gcgctcgccgaggccgtgccgggcgcgcggattctgcggatcgatgccgacagcacgcgc
cgcaagggcagcgcacaggcgcttttttccgacgtgcacgcgggcgaagtcgacatcctg
gtcggcacgcagatgatcgcgaaagggcacgacttccagcgcgtgtcgcttgtcggcgtg
ctcaatgccgataccgcgctgttctcgcacgacttccgcgcgagcgagcggctgttcgcg
cagctgatgcaggtgagcggccgcgcggggcgcgccggactgccgggcgaggtgatggtg
cagacgcgctacccgcgtcacgcgctgtatcacgcgctcgggcggcaggactacgtgggc
ttcgcgaattcgacgctcgccgagcgccgcgacgcgcacctgccgccgttcgtctaccag
gcgctgctgcgcgccgaagggcgcacgctcgacgcggcgctcgcgttcctgctgcaggcc
gcggccgcgttgcccgggctgccgggcgccgatcgcgtgaccgtgtacgacgcggtgccg
atgacgatcgtcaaggtcgcgaatgtccaccgtgcgcagctgctgctcgaaagcgcgtcg
cgggcggcgctgcagcacgcgctgcgcgcatggcagccggaactgcgcgcgctgaagggc
gtgctgcggtggagcgtcgaggtcgatccgctggatatctga
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