Burkholderia cenocepacia HI2424: Bcen2424_0207
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Entry
Bcen2424_0207 CDS
T00415
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03420
Nucleotide excision repair
bch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bcen2424_0207
03430 Mismatch repair
Bcen2424_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_0207
Enzymes [BR:
bch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcen2424_0207
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcen2424_0207
MMR (mismatch excision repair)
Other MMR factors
Bcen2424_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ABK06961
LinkDB
All DBs
Position
1:229619..231355
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AA seq
578 aa
AA seq
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MADIQSPAELASQCALDAMFQCLDEGRSFRLEAGAGAGKTYSLIKALQYLIERNRHGFPK
KNQQIACITFTNVARDEIAARTDKSPLVFCETNHAFCWSLIRGFQKQLRSLVEAMPHWQE
RLAEVGGTLGARMVEYSLGHRSIREDRVSIHHDDVLPLTISLMEHLKFRRMVADRFPIIL
VDEYQDTDRDWVEAIKRLFLSNPDGPLFGFFGDHWQKIYGDGCGRLEHESVTEIGKEANF
RSVKTIVDCLNRMRPELRQEVRDPDSVGHVSVFHTNDWVGQRRAGGHWAGDLPADVGHQA
LEHVKELLAQQGWDLAPGSTKILMLTHRLLATEQGYTSLPTVFRYNDAFTKKEHPHIAYL
VDELEPACDAFAANRFGVMFEALGGTTPLLRSHADKAAWHNAMTRVLELRATGTVGDVID
HLLDQRKPRLPDAIEKRERELRDFDRTAGEEMPERLAEVERLRAVPYAEISALRAYLDGH
SPFETKHGVKGAEFDNVLVVIGRGWNQYNFGEMLGLAAGQAIPAAREESFERNRNLFYVA
CSRPKRRLALLFTQLLSPVAMGTLEQWFSPESVHAVVL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatccaatctccggccgagctggcgagtcaatgtgccctcgacgcaatgttt
caatgcctggatgaaggacggagtttccggctcgaagccggcgctggtgccggcaagaca
tattccctgatcaaggcgttgcagtatctcatcgagcgtaaccggcatggtttcccgaaa
aagaatcagcagattgcgtgcattacattcacgaacgttgccagggacgagattgccgct
cgtactgacaagagcccattggtgttctgcgagactaaccacgccttctgctggtccctg
atcagaggtttccagaagcagctaaggtccttggtggaagcaatgccgcactggcaggag
cgactggcagaagtcggcggcacgctcggcgcccgcatggtcgagtacagcctggggcac
cgctcaattcgcgaggaccgtgtatcgatccaccatgacgatgtgctgcccctcacgatt
tccctgatggagcacctgaagttccgccggatggttgcggatcgctttcccatcatcctg
gtggacgaatatcaggacactgacagggattgggtcgaggcgatcaagcggcttttttta
agcaatccggatggaccgctgttcggcttcttcggagatcactggcagaagatctatggc
gatgggtgcggccggcttgagcacgagtccgtaacggaaatcggaaaggaggccaacttc
cgctcggtgaagacgatcgtggattgtcttaaccggatgcggcctgagttgcgccaggaa
gtcagggacccggattctgtgggccacgtgagcgtttttcataccaacgactgggtgggg
caacgccgagccggaggacattgggccggcgaccttccggccgatgtcggtcatcaggcg
cttgagcacgtcaaggagctcctggcacagcaaggatgggatcttgcgccggggagcacg
aagatcctgatgttgacgcacaggctgctcgcaaccgagcagggctacaccagcctgcca
accgtttttcgctacaacgacgccttcaccaagaaagagcatccgcatattgcctatctc
gtcgatgaactcgaaccggcctgcgacgcgtttgcggcaaaccggttcggagtgatgttc
gaggcgctcggcgggacgacgccacttcttcgcagccatgcggacaaagcggcctggcac
aatgcaatgacccgcgtcctggaacttcgcgcgacgggcacggttggagacgtgatcgat
catcttcttgatcaacgcaagccccggcttcctgacgcgatcgaaaagcgcgaacgcgaa
ctacgcgacttcgatcggactgccggcgaagagatgccggaaaggcttgccgaagttgag
cgactgcgcgctgttccctacgcggagatatcagcattgcgggcgtacctggacggtcat
tcaccctttgagaccaagcacggagtgaagggtgccgaattcgacaacgtcctggtcgtt
atcggtcggggatggaatcagtacaactttggcgagatgctcgggttggcggctggacaa
gcgattccggcagcgagggaggagtctttcgagcgcaaccgcaatctgttctatgtcgcg
tgttctcgccccaaacggcgccttgcactgctattcacccagttactgtcgccggtggcg
atgggcacgctggaacaatggttttcgcccgagagcgttcacgccgtcgtgctctga
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