Burkholderia cenocepacia HI2424: Bcen2424_1006
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Entry
Bcen2424_1006 CDS
T00415
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03030
DNA replication
bch03430
Mismatch repair
bch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcen2424_1006
03430 Mismatch repair
Bcen2424_1006
03440 Homologous recombination
Bcen2424_1006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bch03032
]
Bcen2424_1006
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_1006
Enzymes [BR:
bch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcen2424_1006
DNA replication proteins [BR:
bch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcen2424_1006
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcen2424_1006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABK07759
LinkDB
All DBs
Position
1:1113111..1114238
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AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSLADHRITEIGVVEIGPLGVSTWTSLVNPGQAIPP
FIQQLTGISDAMVRDAPTFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGLAFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRQLHDIVPLER
LREQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGERDEALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIARLRPSYNRRPAADAVRAGGAPW
PFEGAVAFEASGERRLFHVIDGWCYLGSAESLDAAARLVADATDGTFEPFTHRLLQTHLA
RGLQVIPLVALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctcgtccgtccgatcccgccagcgaacagccgctcgtcttcgtcgacctt
gaaaccaccggcggctcgctcgccgatcaccgcatcaccgaaatcggcgtggtcgaaatc
gggccgctcggcgtatcgacgtggacgagcctcgtcaatccggggcaggcgattccgccg
ttcatccagcaactgactggcatttcggacgcgatggtgcgtgacgcgccgacgttcgcg
tcgctcgcgccggcactgttcgagcggctcgacggcaagctgttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgccgaattcgagcgcgccgggctggccttcaatccc
gatgtgctctgtacggtgcggctgtcgcgcgcgctgtttccgcgcgaatcgcggcatggg
ctggatgcgttgatcgaacggcatgggctcgttccggccgcgcgccatcgcgcgctggcc
gatgccgacctgctctggcagttctggcgccagttgcacgacatcgtgccgctcgagcgg
ctgcgcgagcagatcgcccggacgacgcgccatttccgtctgggcggcgatctgaccgag
gcctggctggataccgcgccggcagggtgcggtgcgtatgcgctgttcggggagcgtgac
gaagcgctgtatgtcggccgcagtgtgcgcgtgcggcagcggctgcgtgcgctgctgacc
ggcgagcgccgctcgtcgaaggaaatgcggctcgcgcagcaggtgcggcgcgtcgaatgg
cgcgagaccggcaacgagctgggggcgatgctcgccgaagcgcaatggatcgcgcggttg
cgcccgtcgtacaaccggcgccccgcagccgatgccgtccgcgcgggcggggcgccctgg
ccgttcgaaggcgccgtcgcgttcgaggcgagcggcgagcgccgcctgtttcacgtgatc
gatggctggtgctatctcggttcggcggagtcgctcgatgcggccgcgcggctcgtggcc
gacgcaacggacggcacgttcgaaccgttcacccatcgcctgctgcagacgcatctcgcg
cgcggcctgcaggtgattccgctcgtggcgctcacgccggcggattga
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