Burkholderia cenocepacia HI2424: Bcen2424_1048
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Entry
Bcen2424_1048 CDS
T00415
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bch
Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bch03032
]
Bcen2424_1048
03036 Chromosome and associated proteins [BR:
bch03036
]
Bcen2424_1048
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_1048
DNA replication proteins [BR:
bch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Bcen2424_1048
Chromosome and associated proteins [BR:
bch03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Bcen2424_1048
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Bcen2424_1048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABK07801
UniProt:
A0K5M4
LinkDB
All DBs
Position
1:1163104..1163427
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDDR
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctggcgaaaggg
catcgcattgaaattcggggtttcggcagctttggcctcaatcgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aaacctggcaaggaattgcgtgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgaccgttga
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