Burkholderia cenocepacia HI2424: Bcen2424_1216
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Entry
Bcen2424_1216 CDS
T00415
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bcen2424_1216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_1216
Enzymes [BR:
bch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bcen2424_1216
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bcen2424_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
RecD_N
DEAD
AAA_22
AAA_25
MukB
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABK07968
LinkDB
All DBs
Position
1:1345934..1348252
Genome browser
AA seq
772 aa
AA seq
DB search
MTASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPSASARWAARAAFAT
SRATASGHVCVALGALAQRYEAPLDEVRAALAASGVVAFGTLARGDERPLIVDRLDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLSPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARARIAQALGIDEATFVAALPAPDEAA
PVAVPAAQPVSASARAPASPSASAPVSRKSALRSSKVDARQASLFDDEPQDDEVSSTDIA
PPPRAESALTADAGAPDGKAPAWIEADELAWLDTVELPPFDAGDAALASMTAPASPLAGE
AAAAAASTGTPAAAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALEALPADDSA
AASFHDDAGDTLASSTVERLARRFGVYLDALRDALAAPAPDPLPLFDALNRFRILCATRS
GSRGAEHVNALVAAHVRHAARVPLAVGAHWFTGRPIMITRNDYALGLFNGDIGIALPDAH
GVLRVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTREL
VYTAVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRTEVSR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccgacgacatgctcgaattcaccggcggtctcgtcgcgcggctgcccgag
ccggccgatttcggcattgcgctcgcggaaggcttcgcgcgccgcatcggtgacctcgcg
cgacgtgccggtgcgccgtccgcgtcggcacgctgggcggcgcgtgccgcgttcgcgacg
agccgcgcgaccgcgagcggccacgtgtgcgttgcgctcggcgcgcttgcacagcgttac
gaagcgccgctcgacgaggtccgcgcggcgcttgccgcgagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgaacggccgctgatcgtcgaccggctcgatcacctgtacctg
tcgcgctatttcgattacgaacggcggctcgccgatgcgctcgtcgcgcaggccggcgtc
gccgcgccggacgaaggactgtcgcccgaccggttgcgcgacagtctcgcccgttacttc
gggccggccaccggtgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcgggccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgcgcacccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggcgatctgccgcccgag
ctcgcggcgcgcctgcccgacacgtcgtacacgctgcatcggctgctgggcggcggcggg
gcagccggctttcggcatcatcgcgacaatccgttgccgtacgacctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgttgctgggcgacaaggaccaactggcggcggtcgaggccggcgccgta
ttcgcggagctgagcgcgcggccggcgttcaccgccgcggcgcgcgcgcgcatcgcgcag
gcgctgggcatcgacgaggcgacgttcgtcgcggcgttgccggcgccggacgaggcggcg
ccggtagcggttccggccgcgcagccggtttccgcttccgcacgggctccggcgtcgcca
tcggcatccgcgcctgtttcgcgcaaatcggcgcttcggtcgtcgaaagtcgatgcgcga
caggcgtcgctgttcgacgacgaaccgcaggatgacgaagtgtcgtcgaccgacatcgcg
ccgcccccgcgcgccgagtcggcactgaccgccgatgccggcgcaccagacggcaaggca
ccggcctggatcgaggccgacgaactcgcgtggctcgacaccgtcgagctgccgccattc
gacgcaggcgatgcggcgcttgcatcgatgacggcgcccgcatcgccattggccggcgaa
gcggcagccgcagccgcgtccaccggcacgcccgccgcggcgccgctcgcggactgcgtc
gtatggctcgaacgcaattaccgcttcggtctcgattcgccgatcgggcggctgtcgctc
gcgatccgccgcggcgacgtgcaggcggcgctcgaagcgctgcccgccgacgattcggcc
gccgcatcgtttcacgacgatgcgggcgacacgctggcgtcgtcgacggtcgagcggctc
gcccggcgtttcggcgtctaccttgacgcattgcgcgatgcgctggccgcgccggcgccc
gatccgctgccgctgttcgacgcgctcaaccggttccggatcctgtgcgcgacccgcagc
ggctcgcgcggcgcggaacacgtcaatgcgctggtggccgcgcacgtgcggcatgcggcg
cgcgtgccgctcgcggtcggcgcgcactggttcaccgggcggccgatcatgatcacacgc
aacgactacgcgctggggctgttcaacggtgatatcggcatcgcgctgccagacgcgcat
ggcgtgctacgcgtgtggttccggcgcgcggacggcaccgcgcgcgcggtgtcgccggct
gcgctgccgccgcacgaaacggctttcgcgctgacggtgcacaagtcgcagggctcggaa
ttcgacgaggcggcgctcgtgctgcccgcgtcgttcggccgggtgctgacgcgcgagctg
gtctatacggccgtcacgcgcgcccgcacgcgcgtgcaggtgatcgggccgcggcgcgtg
ctggcgcaggcggtcgcgacacgcacgcagcgcgattcggggctcgcggcccgcgtcgac
gaggcgcttgcccggcgccgcacggaggtttcgcgatga
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