Burkholderia cenocepacia HI2424: Bcen2424_1842
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Entry
Bcen2424_1842 CDS
T00415
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bch
Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bch03000
]
Bcen2424_1842
Transcription factors [BR:
bch03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bcen2424_1842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
Mg_chelatase
HTH_23
HTH_50
HTH_28
AAA_5
AAA_2
PAS_4
HTH_22
HTH_30
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ABK08593
LinkDB
All DBs
Position
1:2046611..2048530
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AA seq
639 aa
AA seq
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MPYAVPQAQHADRVLGALAGRLPAPADSARLVSSWQRSLERYRLDPASSIGPRVLTAAEL
REVRDKEEAFLRASGQCLTRLHDMIRVADYCVMLTDAHGVTIDYRIDRERRNDFRHAGLH
IGSCWSESEEGTCGVASVLTDLAPITVHKTDHFRAAFTTLTCSAAPIFSPGGELIGVLDA
SAVHSPDGRDSQRLVYQLVRQSAALIEDGYFVHSTAQHWILFGHPNRHYVEAQPEWLIAF
DECGNIVAANRHARDALPALREPRHIDEIFDATEMPLRDAARLDAIVALRVRATGAPLYA
RLRAPLRRAGREPAAASRRPGTTAPRHVGALTPFLHSSDARIAQQAELALRVASKRLPIL
VLGETGAGKEVFARAIHDAGARRARPFIAVNCGALPEALIESELFGYAAGAFTGARKHGA
RGKIALADGGTLFLDEIGDMPLALQTRLLRVLADGEVVPLGSDTPVRVDLDVICATHRDL
GRMVADGTFREDLYYRLSGATFDLPPLRERADVRDVIAAVFAEEAQATGHVLTLDATLAE
QLAAYPWPGNVRQLRNVLRYACAVCDAARVTRRDLPTDLAAQLGGAPAGALPDDERSRIV
AALTMHRWRPDAAARALGMSRATLYRRIAKYRIVAPHRA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgccgtcccccaggcccagcacgccgatcgtgtcctcggcgcgctcgccgga
cgcctgcccgcgccggcggattccgcgcgtctcgtgtcgtcgtggcaacgatcgctggag
cgctaccgtctcgaccccgcttcgtcgatcggcccgcgcgtgctgaccgcggccgaactg
cgcgaagtgcgcgacaaggaggaagccttcctgcgcgcgtcgggccagtgcctgacgcgg
ctgcacgacatgatccgcgtcgccgattactgcgtgatgctgaccgacgcgcacggcgtg
acgatcgactaccggatcgaccgcgaacgccgcaacgacttccgtcacgcggggctgcac
atcggctcgtgctggtcggaaagcgaggaaggaacctgcggtgtcgcgagcgtgctgacc
gatctcgcgccgatcaccgtgcacaagaccgatcactttcgcgccgcgttcacgacgctc
acctgcagcgcggcgccgatcttctcgccgggcggcgagttgatcggcgtgctcgacgcg
tcggccgtgcattcgcccgacggccgcgacagccagcgcctcgtctatcagctcgtgcgg
cagagcgcggcgctgatcgaggacggctacttcgtgcacagcaccgcgcagcactggata
ttgttcgggcatccgaaccgtcactacgtcgaggcgcaaccggagtggctgatcgcgttc
gacgaatgcggcaacatcgtcgccgcgaaccggcacgcgcgcgatgcgctgccggcgctg
cgcgagccgcgccatatcgacgagatcttcgacgcgaccgagatgccgctgcgcgatgcg
gcgcggctcgatgccatcgtcgcgctgcgggtgcgcgcgaccggcgcaccgctctacgcg
cggctgcgcgcgccgctacgacgcgccggccgtgaaccggccgctgcatcgcgccgcccg
ggcaccaccgcgccgcgtcacgtcggcgcgctgacgccgttcctgcacagcagcgacgcg
cgcatcgcgcaacaggccgaactcgcgctgcgcgtcgcgagcaagcggctgcctatcctc
gtgctcggcgaaaccggcgcgggcaaggaagtgttcgcccgcgcgatccacgacgccggc
gcacggcgcgcgcggccgttcatcgccgtcaactgcggcgcgctgccggaagcgctgatc
gagagcgaactgttcggttatgcggccggcgcgttcaccggcgcacgcaagcacggcgcg
cgcggcaagatcgcgctcgccgacggcggcacgctgtttctcgatgaaatcggcgacatg
ccgctcgcgctgcagacgcgcctgttgcgcgtcctggccgacggcgaggtcgtgccgctc
ggcagcgatacgcccgtgcgcgtcgatctcgacgtgatctgcgcgacgcaccgcgatctc
gggcggatggtggccgacggcacgttccgcgaagacctgtactaccggctgagcggcgcg
acgttcgacctgccgccgctgcgcgaacgcgcggacgtgcgcgacgtgatcgccgccgtg
ttcgccgaggaagcgcaagcgaccggccacgtgctcacgctcgacgcgacgctcgccgaa
cagctcgccgcgtatccatggccgggcaacgtgcggcaactgcgcaacgtgctgcgctat
gcgtgcgcggtgtgcgacgccgcgcgcgtgacgcggcgcgacctgccgaccgacctcgcc
gcgcaactcggcggcgcgccggcgggcgcgctgcccgacgacgaacgcagccgcatcgtc
gccgcgctcaccatgcaccgctggcggcccgacgcggccgcccgggcgctcggcatgtcg
cgcgcgacgctgtaccggcgcatcgcgaagtaccggatcgtcgcgccgcaccgcgcgtga
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