Burkholderia cenocepacia HI2424: Bcen2424_1982
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Entry
Bcen2424_1982 CDS
T00415
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bch
Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bch03016
]
Bcen2424_1982
Enzymes [BR:
bch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bcen2424_1982
Transfer RNA biogenesis [BR:
bch03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bcen2424_1982
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABK08733
LinkDB
All DBs
Position
1:complement(2199182..2199805)
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AA seq
207 aa
AA seq
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MKFRSTPVGHAAVTQLTLPGFDAPPPAPVHRFFFAVMPDTATAARIAGVAKSLQQEKDSP
VDTERLHITLGSLGDFAYVPGATLARARAVADRMEVPSFSVRFDKIISFNRRSGRQPLVL
TGKAGLEDLIDFRRQLRDALKRVGVPVFPSSFTPHVTLLYGAQRPDEYRIEPITWTVFDF
VLIDSWLGKSHYDVLGRWPLRTGSASG
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgctccacgccagtcggacatgctgccgtgactcaactgacgctacccgga
ttcgatgcgccgccgccggctcccgtgcaccgcttctttttcgccgtgatgccagacacg
gccacggccgcgcgcattgccggtgtcgccaaaagcttgcagcaggagaaggacagcccg
gtggacaccgagcgtctgcacatcacgctgggctcgctaggcgacttcgcttacgtgccg
ggcgctacgcttgcacgagcccgcgcggtcgcggatcgcatggaagtgccgtctttctcg
gtgaggttcgacaagatcatcagcttcaacaggcggtccggtcgtcagccgctggtgctg
acggggaaggccggtctggaagacttgatcgattttcggcggcagttgcgagacgcgttg
aaaagggtaggcgtgcctgttttcccctcgagtttcaccccgcacgtgacgctgctgtat
ggcgcacagaggcccgatgagtatcggatcgagccgattacctggaccgtgttcgacttc
gtcctgatcgatagctggctcggcaagtcgcactacgacgtattggggcgctggccgctg
aggaccggcagcgcctcggggtga
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