Burkholderia cenocepacia HI2424: Bcen2424_2316
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Entry
Bcen2424_2316 CDS
T00415
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcen2424_2316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bch03019
]
Bcen2424_2316
Enzymes [BR:
bch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bcen2424_2316
Messenger RNA biogenesis [BR:
bch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcen2424_2316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABK09067
LinkDB
All DBs
Position
1:complement(2574910..2576472)
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AA seq
520 aa
AA seq
DB search
MSAGPAGLTHDVPAAPFERNATMSDSVAKPVDATFDQFGLAPDILKAIVEQGYTTPTPIQ
AQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE
LADQVAANVHAYAKHTPLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQKTAN
LGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQ
TIEVARSNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLE
RDGVVASAIHGDKTQIERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSA
EDYVHRIGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPLDVQTLTIDKPARQRHDER
GGERNNSERGGERGGERGGRRDRDEHRGASGRRSGSTERGGHHRRHEAPVDDFFLKPYEP
SASAKQPDDAQPAQQPEKKGPKRQVAALLGGFGMPRKPSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggcccggccggcctgacgcacgatgtccccgccgcgccttttgagcgaaac
gccaccatgtccgattctgtcgccaagcccgtcgacgcaaccttcgatcaattcggcctt
gcccccgatatcctgaaagccattgtggagcagggctatacgacgccgacgccgatccag
gcgcaggccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggc
accggcaagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggccaac
acgagcgcgtctccggcgcgccaccccgtgcgggcgctgatcctcacgccgacccgcgaa
ctcgccgaccaggtcgccgcgaacgtgcacgcatatgcgaagcacacgccgctgcgcagc
gcggtggtgttcggcggcgtcgacatgaatccgcaatcggccgaactgcgccgcggcgtc
gagatcctgatcgcgaccccgggccgcctgctcgaccacgtgcaacagaagacggcgaac
ctcggccaggtgcagatcctcgtgctcgacgaagccgaccggatgctcgacatgggcttc
ctgcccgatctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgctgttc
tccgccaccttctcgggcgaaatcaagaagctcgcgtcgacctatctgcgcaacccgcag
acgatcgaggtcgcgcgcagcaactcgacgaacgcgaacgtcacgcagatcgtctacgac
gtcgccgaaggcgacaagcaggcggccgtcgtgcaattgctgcgcgatcgcggcctcaag
caggtgatcgtgttctgcaacagcaagatcggcgcgagccgcctcgcgcgcaatctcgaa
cgcgacggcgtggtcgcgtcggcgattcacggcgacaagacgcagatcgagcggatgcag
gcactcgacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcg
cgcggcctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgcg
gaagactacgtgcaccggatcggccgtaccggccgcgcgggcgcgacgggcgacgcgctg
tcgctgtgcagcccgaacgagcgcaagcaactcgccgatatcgagaagctgatcaagcgt
ccgctcgacgtgcagacgcttacgatcgacaagccggcacgccagcgtcacgacgaacgt
ggcggcgagcgcaacaacagtgagcgcggcggcgaacggggtggcgaacgcggcggtcgg
cgcgatcgcgacgagcatcgcggtgcatcgggccgccgctcgggcagcaccgagcgcggc
ggccatcatcgccgccacgaagcaccggtcgacgatttcttcctgaagccgtacgagccg
tcggcgtcggcgaagcagccggacgatgcgcagcccgcgcagcagcccgagaagaaaggg
ccgaagcgccaggttgccgcgctgctcggtggcttcgggatgccgcgcaagccgtcggcg
taa
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