Burkholderia cenocepacia HI2424: Bcen2424_3450
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Entry
Bcen2424_3450 CDS
T00415
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcen2424_3450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bch03000
]
Bcen2424_3450
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_3450
Enzymes [BR:
bch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Bcen2424_3450
Transcription factors [BR:
bch03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Bcen2424_3450
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcen2424_3450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABK10189
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Position
2:complement(278609..280087)
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AA seq
492 aa
AA seq
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MVYSRPMRLDPDTCYDALLSRNRRFDGWFFVGVATTGVYCRPVCPVKPPKAQNCTYYPTA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAATLIDDGFLNAHSVAALARRVGVTE
RHLRRIFGAQFGVSPVEFAQTQRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQR
YGLNPLRLRKGAGASADGDMTFPLPYRPPFAWADLMRFLAQRQIDGVERIDAKGYARIVE
LPNRHDGGRVAGWLSVTHVPQRFALAVTVSPALTPAVPAVLARVRRLFDLDSRPDVIDAH
LGDLASGSPGLRVPGAFDGLEIAIRAIAGEQLAAAQADTPLLARIAERFGHSVDGAPPGL
THALPCAATLAALPPSALETIGIERDMAHAIVSLARAVDDGTLALEPMAPLDATLAALRA
LPGFDERAVQYVAMRAMAWPNAFPADDALLPARPERTDRTRVPSSAPHAARWAPWRAYAA
LHVWRLHGDGLR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagtcgccccatgcgcctcgatcctgacacctgctacgacgccctgctttcg
cggaaccgccgcttcgacggctggttcttcgtcggcgtcgcgacgaccggggtgtactgc
cgcccggtctgcccggtgaagccgccgaaagcgcaaaactgcacctactacccgaccgcc
gcggccgccgagaaagccggcttccggccctgcatgcgctgccgccccgaactcgcgccc
ggccacgggctgctcgacctgtccggcaatctcgccgacgcggccgcgacgctgatcgac
gacggtttcctgaatgcgcattccgtcgccgcgctcgcacggcgcgtcggcgtgaccgaa
cgccatctgcgccgcatcttcggcgcgcagttcggcgtgtcgccggtcgagttcgcgcag
acgcagcggctgctgatggccaagcggctgctgaccgataccgcgctgccggtggccgtc
gtcgcgtcgacggccgggttcggcagcgtgcgacgcttcaacgacctgttccgccagcgc
tacggcctcaatccgctacggctgcgcaaaggggccggcgcgtcggccgacggcgacatg
accttcccgctgccgtaccggccgccgttcgcgtgggccgacctgatgcgttttctcgcg
cagcggcagatcgacggcgtcgaacgaatcgacgcgaagggttatgcacgcatcgtcgaa
ttgccgaatcgacacgacggcggccgcgtcgccggctggctgtccgtcacgcacgtgccg
cagcgcttcgcgctggccgtcaccgtgtcgcccgcgctgacgccggccgtgccggccgtg
ctcgcacgcgtgcgccggctgttcgatctcgacagccgccccgacgtgatcgacgcgcat
ctcggcgatctcgcgagcggctcgccggggttgcgcgtgcccggcgcgttcgacggtctg
gagatcgcgatccgtgcgatcgcgggcgagcagctggcggcggcgcaggccgatacgccg
ttgctcgcacggatcgctgagcgcttcggtcactcggtcgacggtgcgccgcccggcctc
acgcacgccctgccctgcgccgcgacactagccgcactgccgccttcggccctcgaaacg
atcggcatcgagcgagacatggcgcatgcgatcgtgtcgctcgcccgtgctgtcgacgac
ggcacgctcgcgctcgaaccgatggcgccgctcgatgcgacgctcgccgcgctgcgcgcg
ctgcccggcttcgacgaacgcgcggtgcagtacgtcgcgatgcgtgcgatggcatggccg
aacgcgttccccgccgacgacgcgttgctgcccgcccgccccgagcgcaccgaccgcacg
cgcgtgccatcatcagcgccgcatgcggcacgttgggcgccgtggcgcgcgtatgccgca
ctgcatgtgtggcgccttcatggagatggattgcgatga
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