Burkholderia cenocepacia HI2424: Bcen2424_3872
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Entry
Bcen2424_3872 CDS
T00415
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch03030
DNA replication
bch03410
Base excision repair
bch03420
Nucleotide excision repair
bch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcen2424_3872
03410 Base excision repair
Bcen2424_3872
03420 Nucleotide excision repair
Bcen2424_3872
03440 Homologous recombination
Bcen2424_3872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bch03032
]
Bcen2424_3872
03400 DNA repair and recombination proteins [BR:
bch03400
]
Bcen2424_3872
Enzymes [BR:
bch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcen2424_3872
DNA replication proteins [BR:
bch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bcen2424_3872
DNA repair and recombination proteins [BR:
bch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bcen2424_3872
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcen2424_3872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
ABK10609
LinkDB
All DBs
Position
2:733158..735911
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTERVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLTQYDTLDGVIEHAADIKGVVGDNLRRALDFLP
LGRQLVTVDTSCDLTPHLESIEASLKSDGEARDLLRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVIAADVVREYDTIQTWEQFDAWFAKIDAAALTAFDTETTALDPMLARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVVESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHHALYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDAR
LHAQSTEIATRLIELEGEAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPTTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRATAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDGWLTRDQLASRMIMQVHDELVLEVPEGELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgccttgcaggtcgagccgatccacggc
gccgtgcgcgcgctcggctggccgctgctgatggtcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtgaccgagcgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgaccgcgacggcgtgatcgcgaagttcggtgtgccgcccgagcgcatcatc
gactatctcgcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctgacgcaatacgacaccctcgacggcgtgatcgaacac
gcggccgacatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcggccgccagctcgtgaccgtcgatacgtcgtgcgatctcacgccgcatctcgaatcg
atcgaagcctcgctcaagagcgacggcgaggcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgacagcgcgcccgcggaaggtgggggc
gccgatgcgccggaaggcgagccggccccggtgatcgcagccgacgtcgtgcgcgaatac
gacacgatccagacttgggaacagttcgacgcgtggttcgcgaagatcgacgcggccgcg
ctgaccgcgttcgacaccgagaccaccgcgctcgatccgatgctcgcgcggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggcggcctacctgccggtcgcgcaccgcggcccc
gacatgcccgagcagcttccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtacgtggtcgaa
tcgcaccgcacacacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtacgaggacgtggcgggcaagggcgcgaagcagatcggtttcgacgaagtggcgctc
gcgcaggccgccgaatacgcagccgaagatgccgacatcacgctgcagcttcatcacgcg
ctgtatccgcaggtcgcacgcgagccgggcctcgagcgcgtgtaccgcgagatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcacgggcgtgctgatcgacgatgcgcgt
ctgcacgcgcagagcaccgaaattgcgacgcgcctgatcgagctcgagggcgaggcgtac
gaactggcgggcggcgaattcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaagctggccgaggactacccgctgccgaagctgctgctcgagcatcgc
gggttgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaaccccacc
accggccgcgtgcacacgaactatgcgcaagcggtcgcggtcacgggccgccttgcgtcg
aacgaccccaatcttcagaacattccggtgcgcacggccgaagggcggcgcatccgcgag
gcgttcatcgcgtcgccgggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcgactgccgccgaggtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtaatcaacttcgggctcatctacgggatgagcgcattc
gggctcgcatcgaatctcggcatcacgcgcgacgcggcgaagctctatatcgaccgctat
ttcgcccgctatccgggcgtcgcgcagtacatggaagatacgcgcgcgacggcgaaggag
aagggctacgtcgaaaccgttttcggccgccgtctctggctgccagagatcaacggcggt
aacggcccgcgccgccaggcggccgagcgtgcggccatcaatgcaccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacggctggctcacgcgcgaccag
ctcgcatcgcgaatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgaaggc
gagctatcgctcgtgcgcgagaaactgccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgccgaagtgggtgccggcgcgaactgggaagaggcacactga
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