Burkholderia cenocepacia HI2424: Bcen2424_3886
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Entry
Bcen2424_3886 CDS
T00415
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bch
Burkholderia cenocepacia HI2424
Pathway
bch02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bcen2424_3886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bch03021
]
Bcen2424_3886
Transcription machinery [BR:
bch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcen2424_3886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
ABK10623
LinkDB
All DBs
Position
2:750824..753241
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AA seq
805 aa
AA seq
DB search
MAKTTGGKKATGKGSTEPTKKVTAAKSASSTRTTSSATSAPAGKKTAAGTAQAAPAPAAR
TRAAARPDSGPAKPAAKRASAKSARDTTADADETAVRTTHAPTVQPAVVQQPRVDIAGTA
NSMTKKLNEVSVEDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEEL
EERRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDA
ETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDG
FSAKEAEAIENEDEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLEKFSQISEWFD
KMRRAFEKEGYKSKAYLKAQETIQSELMTIRFTARTVERLCDTLRAQVDEVRQVERQILH
IVVDKCGMPRSEFIARFPGSETDLDWAEKITAEGHPYSAVLSRNVPAIREQQQRLLDLQA
RVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTV
APADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgacaggcggaaagaaagcaacaggcaagggctcgacggagccgaccaag
aaggtcacagcggccaagtctgcttcttccaccaggacaacgtcttcagccacgtcagcc
cctgcaggaaagaaaaccgcggccggcactgctcaggctgcgccggcgccggcagccaga
acacgggctgccgccagacccgactccgggccggccaagccggcggcgaagcgggcaagt
gcgaaaagcgcaagggacacgactgccgacgcggacgaaacggcagtacgtactactcat
gcacccacggttcaaccggctgtcgtccagcagccgcgagtcgatatagccggtacggcg
aactccatgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgac
gagcagcccgcagccgcggctgcaccgggcaagtccaaggtgcgcgatcgtcgcgccaag
gaaaaggcgctgctgaaggaagcgttcgcgacgagcacgccgggcacggccgaggagctc
gaagagcgccgcgtgaaactgcgcgcgctgatcaagctcggcaaggagcgcggcttcctc
acgtacgccgaaatcaacgaccacctgccggacaacttcaccgagacggaagccctcgag
ggcatcatcggcacgttcaacgacatgggcgtggcggtttacgagcaggcgccggacgcg
gaaacgctgctcctgaacgacaacgcgcccgccgcgtcgtcggacgatgaagtcgaggag
gaagcggaagtcgcgctgtccaccgtcgattcggaattcggccgcacgaccgatccggtc
cggatgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgag
atcgcgaagcggatcgaggacggcctgcgccacatggtgatggccatctccgcgtgcccg
acgacgatcgccgacatcctcgcgatggccgaacgcgtcgcgaacgaagagatccgcgtc
gacgagctcgtcgacggcctgctcgatccgaatgcttcggactccgccgatacggacggc
ttctccgcgaaggaagcggaagccatcgagaacgaggacgaggaagccgaagaggaagag
gaagaagaggaagaggaggaagacgacggtgccgcgcaggcatcggcgaacgccgcccag
ctcgaagccctcaagcgcgcatcgctcgagaagttctcgcagatcagcgagtggttcgac
aagatgcgccgcgcgttcgagaaggaaggctacaagtcgaaggcctacctgaaggcgcag
gaaacgatccagagcgaactgatgacgatccgcttcaccgcgcgtaccgtcgaacgcctg
tgcgacacgctgcgcgcgcaggtggacgaagtgcgtcaggtcgagcgtcagatcctgcac
atcgtcgtcgacaagtgcggcatgccgcgctcggaattcatcgcgcgcttcccgggcagc
gagacggatctcgactgggccgagaagatcaccgcggaaggccatccgtacagcgcggtg
ctgtcgcgtaacgtcccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcg
cgcgtcgtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaa
ctgaaggcgcgtcaggcgaagcgcgaaatgaccgaggccaacctgcgtctcgtgatctcg
atcgcgaagaagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaac
atcggcctgatgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacc
tatgcgacgtggtggatccgtcaggccatcacgcgttcgatcgccgaccaggcgcgcacg
atccgtattccggttcacatgatcgaaacgatcaacaagatgaaccgcatctcgcggcag
atcctgcaggaaaccggtctcgagccggacccggcaacgctcgccgagaagatggagatg
ccggaagacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacg
ccgatcggtgacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtc
gcgccggcggatgccgcgctgcatgccagcatgcgcgacgtcgtgaaggacgtgctcgat
tcgctgacgccgcgcgaggcgaaggtgctgcggatgcgtttcggtatcgagatgagcacc
gatcacacgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcag
atcgaggccaaggcgctgcgcaagctgcgtcacccgagccgttccgacaagctgaagtcg
ttcctcgaagggaactga
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