KEGG   Burkholderia cenocepacia HI2424: Bcen2424_5342
Entry
Bcen2424_5342     CDS       T00415                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
bch  Burkholderia cenocepacia HI2424
Pathway
bch02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bcen2424_5342
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:bch02022]
    Bcen2424_5342
Two-component system [BR:bch02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Bcen2424_5342
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA HTH_30 AAA_16 FleQ HTH_50 AAA_2 Rv3660c_N AAA_22 nSTAND3 HTH_5
Other DBs
NCBI-ProteinID: ABK12075
LinkDB
Position
2:2433079..2434440
AA seq 453 aa
MEDEIRVLVVEDDENVRIGVEQAVALAGFPVDAFASAADALAHVAPGAPVVIVSDVRMPG
IDGLQLLDRVMAIDAQIPVVLISGHADISTAVGAMQVGAYDFIEKPFSSDLIAGRVARAV
EKRRLTLEVQGLRAALNNWQGIEAFVLGKSPAMADVRKKILRLADTSVSVLITGETGTGK
ELIARSLHDFGGRRDAHFVALNCGGLPEQVFESELFGHEAGAFTGAIKKRIGKIEWADGG
TLFLDEIETMPIALQIKMLRVLQERVVERLGANDLIPVDCRVVAASKADLAELAADGRFR
ADLLYRLNVAQIELPPLRERREDVPLLFEHFVLAAARRFGQPAPVVTAAQVSELMMHAWP
GNVRELQNVADRFVLGLTGDSLLSSGGAPTAGSTLAEQLAYFERMLIEDMLRRHNGNVAD
ASEALGMPKKTLYHKLRNLRIPARGDAAADGGE
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggaagatgagattcgggtgctggtcgtcgaggatgatgaaaacgtccggatcggcgtc
gagcaggccgtcgcgctcgccgggttcccggtcgacgcgttcgcgtcggccgccgacgcg
ctcgcgcacgtcgcgcccggcgcgccggtggtgatcgtgtcggacgtgcggatgccgggc
atcgacgggctgcagttgctcgaccgcgtgatggccatcgatgcgcagatcccggtcgta
ctaatcagcggccacgcggacatctcgacggccgtcggcgcgatgcaggtcggcgcgtac
gacttcatcgagaaaccgttctcgtcggacctgatcgccggccgcgtcgcgcgcgcggtc
gagaagcgtcgcctgacgctcgaggtgcaggggctgcgcgcggcgctgaacaactggcag
ggcatcgaggcgttcgtgctcggcaagtcgcccgcgatggccgacgtgcgcaagaagatc
ctgcgcctcgccgatacgtcggtgtcggtgctgatcaccggcgagacgggcaccggcaag
gaactgatcgcgcgcagcctgcacgacttcggcggtcggcgcgacgcgcatttcgtcgcg
ctgaactgcggcggcctgcccgagcaggtgttcgagagcgagctgttcggccatgaggcc
ggcgcgttcaccggtgcgatcaagaagcgcatcggcaagatcgaatgggcggacggcggc
acgctgttcctcgacgagatcgagacgatgccgatcgcgctgcagatcaagatgctgcgc
gtgctgcaggagcgcgtggtcgagcggctcggcgcgaacgacctgattccggtcgactgc
cgcgtggtggccgcatcgaaggccgatctcgccgaactcgccgccgacgggcgctttcgc
gcggatctgctgtatcgcctcaacgtcgcgcagatcgagttgccgccgctgcgcgaacgg
cgcgaggacgtgccgctgctgttcgagcatttcgtgctcgcggccgcgcggcgcttcggg
cagccggcgccggtcgtcaccgccgcgcaggtgtccgaactgatgatgcacgcgtggccc
ggcaacgtgcgcgaactgcagaacgtggccgaccgcttcgtgctcgggctgaccggcgac
agcctgctgtcgtccggcggcgcaccgacggccggcagcacgctcgcggaacagctcgcg
tatttcgagcggatgctgatcgaggacatgctgcggcgtcacaacggcaacgtcgcggac
gcgagcgaggcgctcggcatgccgaagaaaacgctctatcacaagctgcgcaacctgcgg
attcccgcgcgcggcgacgcggcggccgacggcggcgaatga

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