Burkholderia cenocepacia HI2424: Bcen2424_5518
Help
Entry
Bcen2424_5518 CDS
T00415
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bch
Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bch03000
]
Bcen2424_5518
Transcription factors [BR:
bch03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bcen2424_5518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS_4
Mg_chelatase
PAS
AAA_2
AAA
PAS_8
AAA_3
AAA_16
AAA_7
PAS_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABK12251
LinkDB
All DBs
Position
2:2621881..2623869
Genome browser
AA seq
662 aa
AA seq
DB search
MDLSSTKAVGPADRAVRPRIWAMGISRLRELFREIAGEFDERADVRIVTRAYEDALSAIA
EAGTARPDVIVAAGSNGGFLKTRAQVPVVVVSPTGFDVMQALARARRDAARIALVSAGET
PPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLRDRGIETIVGPGLVTDLAASVGMGAVF
LYSHASVRKAVETALEVAYATHAEAFRRQRLDTLLQHLRDGVVALDAHGRVEAINQRLAS
ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTF
QESRAVERLDRALRSQPTTQQFAARYALDDVVGASAPMTRVRELVRRYAKSDATVLVLGE
SGTGKEMIAQSLHALSARRSYPFVAVNCGAFPEALLESELFGYEEGAFTGARRGGKTGLF
EAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV
EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVRDTDDALR
VLDATQATLARYRWPGNVRELQNVVERIAVELAEAVDESDPGAACAALAPGALHVIAPEL
FAAPLDAAGAADDDAQTLQARRRRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLS
AK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcctcgaccaaggccgtcggcccggccgaccgcgccgtgcgcccgcgcatc
tgggcgatgggcatcagccggctgcgcgagctgtttcgcgagatcgccggcgaattcgac
gaacgcgccgacgtgcggatcgtcacgcgcgcctacgaagatgcgctgagcgcgatcgcc
gaggccggcaccgcgcgccccgacgtgatcgtcgcggccggctcgaacggcggcttcctg
aaaacgcgtgcgcaggtgccggtggtggtcgtgtcgcccaccggcttcgacgtgatgcag
gcgctggcgcgcgcgcggcgcgacgcagcgcggatcgcgctcgtgagcgccggggaaacg
ccgcccgaggtgcgccgcttcgtcgccgcgtacggcctcgacgtgcagtttgcgtcatat
cagtccgcccaggaagcggaggcctgcgtgcacgacctgcgcgatcgcggcatcgagacg
atcgtcggcccgggcctcgtcaccgatctcgcggccagcgtcggcatgggcgcggtgttc
ctgtattcgcatgcgtcggtgcgcaaggccgtcgagacggcgctcgaagtcgcgtatgcg
acgcacgccgaggcgttccgccgccagcggctcgataccctgctgcaacatctgcgcgac
ggcgtggtcgcgctcgacgcgcacggccgcgtcgaagcgatcaaccaacggctcgcgtcg
gcgctcggggtcgaacccgcggcggccgtcggccgcgcgctcgtcgatctgcgtcccgag
ttgcgcacgctacgcggcgaggacggcgacgcgctcgcgaccgtgcgcggcgtgcgttac
gtcgtgcatcgcgggccgctggtcgatcgcggcgtcacgtcgggcagcgtgctcacgttc
caggaatcgcgcgcggtcgaacggctcgatcgcgcgttgcgttcgcaaccgaccacgcag
cagttcgccgcccgttacgcgctcgacgacgtggtcggcgcctcggcgccgatgacgcgc
gtgcgcgagctcgtgcgccgctacgcgaaatccgatgcgaccgtgctcgtgctcggcgag
agcggcaccggcaaggagatgatcgcgcagagcctgcatgcgctgtccgcgcggcgcagc
tatccgttcgtcgcggtcaactgcggcgcgtttcccgaagcgctgctcgagagcgaactg
ttcggctatgaggaaggcgcgttcaccggcgcgcgacgcggcggcaagaccggcctgttc
gaggccgcgcaccgcggcacgctgtttctcgacgagatcggcgagatgccgccgtcgctg
caaagcaggctgctgcgcgtgctgcaggagcgcgaggtgattcgcctcggctcgaccgag
ccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccgctgctcgccgccgtc
gaggccggcacgttccgcgcggatctctattaccggctcaacatcctgaacatcggcctg
ccgccgctgcgcgagcgcgcggccgacattcccgcgctcgcggcgacactgctcgtgcag
gccgcgcggcgcgagccgcggctcgccgaacgcgtgcgcgacaccgacgacgcgctgcgc
gtgctcgacgcgacgcaagcgacgctcgcgcgctaccgctggcccggcaacgtgcgcgaa
ctgcagaacgtggtcgagcggatcgcggtggagctggcggaggcagtcgacgaaagcgat
ccgggcgccgcgtgcgcggcgcttgcccccggtgcgctgcacgtgatcgcgcccgagctg
ttcgccgcgccgctcgatgcggccggcgccgccgacgacgatgcgcagacgctgcaggcg
cgccgccgtcgcgcggaagccgacgagatccgcgcggtactcgacgcatgcggcggcgac
cgcgaccgcgcgtgcgcgatgctcggcatcagcaagacgacgctatggcggaagttgtcg
gcgaaatag
DBGET
integrated database retrieval system
