Burkholderia cenocepacia HI2424: Bcen2424_5983
Help
Entry
Bcen2424_5983 CDS
T00415
Name
(GenBank) YadA C-terminal domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
bch
Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:
bch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bch02000
]
Bcen2424_5983
Transporters [BR:
bch02000
]
Other transporters
Pores ion channels [TC:
1
]
Bcen2424_5983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
DUF285
Motif
Other DBs
NCBI-ProteinID:
ABK12716
LinkDB
All DBs
Position
3:complement(124247..128662)
Genome browser
AA seq
1471 aa
AA seq
DB search
MNKSFKSIWNEALGAWVAASELDRARGKRVASSTRAPECAAHGEAATHADIPSAPSVLKL
AVLTATACLGLFHASAHAQYAQDGGTASGGTTAISIGLGSTAAQQNSTAVGNLSTAQGLS
ATALGPGAHAMGDGSTSVGINSQATGVNSSALGVQAIGSGDYSVAIGNLSSATQSGAVAM
GSGAAATGVSAVGLGNNALASGQYAAAMGLGASAAGAQSVSLGYASHATNTGSVALGNQS
TSSGAAGVAVGSGALTTGNSGVAMGVNSGAKGTASIAIGWGGTAGVPGSGTQSLGTSSIA
MGSNTNAGADQALAFGLNANASGVSSIAMGVQSTATQQFATALGNLSLATGVSSSALGPG
ATASATNATAVGINSVAAATSTVAIGDSNSVAAAAGAGSVAGGYGSKVLGGIGAVALGYG
QTVSGNGAVAIGDPSTAIGTGAVTMGSNNTANGDGAVAIGNTNNAQGTGSLALGNTSTAA
AAGAVAFGASAVANNANDVALGSGSTTAAPNPTASAVIGGVTYNFNGINPASVVSVGNVG
AERQITNVAAGRISSSSTDAINGSQLAATNTALDSLSTSTASSITSLSTGVSSLSTGLSS
TNSAVTSLSTSTSTGISSLSTGLSSTNSAVTSLSTSTSTGISSLSTGLSSTDSTVTSLST
STSTGLSSANSSIASLSTSTSTGIGSLSTGLSSTDSTVTSLSTSTSTGLSSVNSSITSLS
TSTSTGIGSLSTGLSSTNSAVTSLSTSTSTVVGSLSTGLSSTNSSVTSLSTSTSTGISSL
STGLSSTNSSVTSLSTSTSTVVGSLSTGLSSTNSNLTSLSTSTSTVVGSLSTGLSSTNSS
ITSLSTSTSTVVGSLSTGLSSTNSNLTSLSTATSTGISSLSTGLSSIANNNTNLGNSTAG
AIGGGATYDPTTGTISSPSYVTYNSDGSTTINNNVGSAIDNINANGIKYFHANSTAPDSQ
ALGLDSVAIGPNAISRVDGSIALGSGSVADRAVVPSSGILRNGSASIPFDTTDQTLLGAV
SVGDATNKTYRQITNVADGTGQQDAVTVRQLTGALQSFAVTGQKYFHANSTAADSLAVGA
ESVAVGPTTVVNGDNGVGIGNGAIVDQTAPGGIAIGQAASSAQSDAIALGSGATATGAQS
VAQGANAVAVSVGSVALGSGARSTATDALALGAGASATFANSVALGAGSLTTVGALTNYV
AYGLSSPQSSAGEINIGNRQITGLAAGKNGTDAVNVSQLDSVASQLTTLIDQRTANLGGQ
YTTNPNGANVPPGASGSNSSAGGSGAVASGSNSTAVGNNALASGNGSSAIGVGATAAGNN
STAIGTGSNDGGRSNVVAVGSADSARQVVNVAAGTQGTDAVNVNQLNAVSNQFTQSLNTV
NNQLTQMQQQIQQTDSMAREGIAATAAMASIPHMDRDSNFAMGVGTATFQGQKAMAVGVQ
ARVTENLKATLNGGFAGSQRVVGAGMLYQWK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcgttcaagtcgatctggaacgaagcactgggggcctgggttgcggcttcg
gagcttgaccgcgcacgcggcaagcgtgttgcgtcgtcgacgcgcgcgccggaatgcgcc
gcgcacggagaagccgcgacgcacgcggacataccatcggcgccttcggtgttgaagctg
gccgtgctgacggcgactgcttgtctcgggttgttccatgcgagtgcgcatgcgcaatac
gcgcaggatggcggtaccgcgtcgggcggcacgacggcgatctcgatcggcctcggttcg
actgccgcgcagcagaattccaccgcggtcggcaacctgtcgacggcgcagggtttgtcg
gccacggcgctcggcccgggcgcacatgcgatgggcgatggttcgacgtccgtcggcatc
aactcgcaggcgaccggcgtcaacagttcggcgctcggcgtgcaggcgatcggttccggc
gactattcggtcgcgatcggcaacctgtcgagcgcgacccaaagcggcgcggtcgcgatg
ggcagcggcgcggcggcgaccggtgtttccgccgtcgggctgggcaacaacgcgctggcg
tccggccagtacgcggcggcgatggggctcggtgccagcgcggcgggcgcgcagagcgtc
tcgctcggctatgcgtcgcatgctacgaacacgggctccgtcgcgctcggcaaccagtcg
accagttcgggcgcggccggcgtggccgtcggcagcggtgcgctgacgaccgggaattcc
ggcgtggcgatgggcgtgaacagcggggcgaagggcaccgcgtcgatcgcgatcggctgg
ggcggcaccgccggcgtgcccgggtcgggcacgcagtcgctcggcacgagttcgatcgcg
atgggctcgaacacgaatgccggcgccgatcaggcgctggccttcggcctgaacgccaat
gcgtcgggcgtcagttcgatcgcgatgggtgtgcagtcgaccgcgacccagcagtttgcg
accgcgctcggcaatctgtcgctggcgaccggtgtttcctccagcgcgctggggcccggg
gcgacggcgtcggccacgaatgcgacggcggtcggtatcaacagcgtcgcggcggcgacg
tcgaccgtggcgatcggcgattccaactcggttgccgcggcggcaggcgcgggttcggtc
gcgggcggctacggctcgaaggtgctgggcggtatcggcgccgtcgcgctgggctatggc
cagacggtgagcggcaacggcgcggtagcgatcggcgatccgagcaccgcgatcggcacc
ggcgcggtcacgatggggtcgaacaacaccgcgaacggcgacggcgcggtagcgatcggc
aacaccaacaatgcgcagggcacgggttccctggcgctcggcaatacgtcgacggcagcg
gcggcgggcgccgtcgcgttcggcgcgtcggccgtcgccaacaacgcaaacgatgtcgcg
ctcggctcgggatcgacgacggccgcgccgaatccgacggccagcgcggtcatcggcggc
gtcacgtacaacttcaacggcatcaacccggcgagcgtcgtcagcgtggggaatgtcggc
gccgagcgccagatcaccaacgtcgcggccgggcggatcagttcgtcgagtacggacgcg
atcaacgggtcgcaactcgccgcgacgaatacggcgctcgattcattgtcgacgtcgacg
gcgtcgagcatcacgtcgttgtcgaccggggtttcgtcgctgtcgaccggtctgagttcg
accaatagcgcggtgacgtcgttgtcgacttcgacgtcgaccgggatcagttcgctgtcg
acggggctgagctcgaccaatagcgccgtgacatcgctatcgacttcgacgtcgaccggc
atcagctcgttgtcgaccggcctgagttcgaccgacagcacggtgacgtcgctgtcgacg
tcgacatcgacggggctgtcgtcggccaatagttcgatcgcgtcgttgtccacctcgacc
tcgacgggcatcggttcgttgtcgaccgggctgagttcgaccgacagtacggtgacgtcg
ctgtcgacgtcgacctcgacggggctgtcgtcggtcaatagttcgatcacgtcgttgtcc
acctcgacgtcgacgggtatcggttcgctgtccaccggcctgagttcgaccaacagtgcg
gtgacctcgctgtccacgtccacgtcgacggtcgtcggatcgttgtccacgggcttgagt
tcgaccaacagctcggtgacgtcgctgtccacgtcgacctcgacgggcatcagctcgctg
tccaccggcctgagttcgaccaacagttcggtgacgtcgctgtccacgtcgacgtcgacg
gtcgtcggctcgttgtccaccggcctgagctcgaccaacagcaacctgacctcgctgtcc
acgtcgacctcgaccgtcgtcggctcgctgtccaccggcttgagttcgaccaacagctcg
atcacgtcgctgtccacgtcgacgtcgacggtcgtcggttcgttgtccaccggcctgagt
tcgacgaacagcaatttgacctcgttgtcgaccgccacgtcgaccgggatcagctcgctg
tcgacgggcctcagctcgattgcgaacaacaacacgaacctcggcaacagcacggccggc
gcgatcggcggcggcgccacctacgatccgaccaccggcacgatctcgtcaccgtcgtac
gtgacgtacaacagcgacggctcgacgacgatcaacaacaacgtcggctcggcaatcgac
aacatcaacgcgaacggcatcaagtacttccacgcgaactcgaccgcgccggacagccag
gcgctcggcctggacagcgtcgcgatcggaccgaacgcgatctcgcgcgtggacggcagc
atcgcgctcggctccggttcggtggccgatcgcgccgtggtgccgtcgtcgggcatcctc
cgcaacggcagtgcgtcgatcccgttcgacacgacggatcaaacgctgctcggcgcggtg
tcggtcggcgatgcgactaacaagacgtatcgccagatcaccaacgtcgcggacggcacc
ggccagcaggatgcggtgacggtgcgccagttgaccggcgcgctgcagtcgttcgcggtc
accggccagaagtacttccacgcgaattcgacggcggccgattcgctcgcggtcggcgcg
gaatcggtcgcggtcgggccaacgacggtcgtcaacggcgacaacggagtgggtatcggc
aacggcgcgatcgtcgaccagaccgcgccgggcgggatcgcgatcggccaggcggcgagt
tccgcgcagtccgacgcgatcgcgctgggtagcggcgcgacggcgaccggcgcgcagtcg
gtcgcgcaaggcgcgaatgcggtggcggtcagtgtcggcagcgtcgcgctcggctcgggg
gcgcgcagcacggcgaccgatgcgctcgcgctcggtgccggtgcgtcggcgactttcgcg
aacagcgtcgcgctcggcgccggttcgctgaccacggtcggcgcactgacgaactacgtc
gcgtacgggttgagcagcccgcagtcgtcggctggcgaaatcaacatcggcaaccgccag
atcaccgggctcgcggccggcaagaacggcaccgacgcggtgaacgtgtcgcagctcgat
tcggtcgcgagccagttgacgacgttgatcgaccagcgcacggccaacctcggcgggcag
tacacgacgaacccgaacggcgcgaacgtgccgccgggcgcgagcggttcgaattcgtcg
gcgggcggctcgggggcggttgcatcgggctcgaacagcacggcggtcggcaacaatgcg
ctcgcatcgggcaacggctcttccgcgatcggcgtgggcgccacggcagcgggcaacaac
tcgaccgcgatcggcacgggcagcaacgacggcggccgctcgaacgtggtcgcggttggc
tcggcggattcggcgcgccaggtcgtgaacgtcgcggccggtacgcagggcaccgacgcg
gtgaacgtgaaccagctgaacgcggtatcgaaccagttcacgcagtcgctgaacacggtc
aacaaccagctcacgcagatgcagcagcagatccagcagaccgattcgatggcccgcgag
gggatcgccgcgaccgccgcgatggcgtcgattccgcacatggaccgcgattcgaacttc
gcgatgggggtcggcacggcgacgttccagggccagaaggccatggcggtcggcgtgcag
gcgcgcgtcacggagaacctgaaggcgacgctgaacggcggtttcgccggcagccagcgc
gtcgtcggcgcgggcatgctgtatcagtggaagtga
DBGET
integrated database retrieval system
