Burkholderia cenocepacia HI2424: Bcen2424_6944
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Entry
Bcen2424_6944 CDS
T00415
Name
(GenBank) Type IV secretory pathway VirD4 components-like protein
Organism
bch
Burkholderia cenocepacia HI2424
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Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
TMEM141
AAA_10
Motif
Other DBs
NCBI-ProteinID:
ABK13670
LinkDB
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Position
p1:157460..159568
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AA seq
702 aa
AA seq
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MADQRSPSGLATFSRGTALWWQQAKLLTSAIVAVVIAAILVGALAGGAYLYFVTSAETRY
LTIKHVEAEILTVVPMANPNVSFHLGNDDTALPPAAALSFTEDAADEFFIYARNAALYAV
LTAIAVTFLSVLFWMEYGRGKLTDKQVRGAKLVKAKELIKELEARDDASPYRIAGVPMRK
KAEVLGTLFSGAQGSGKSQQFFALMDQVRARKKRAIVYDPSGEFTAAYYREGKDVILNPL
DARSPNWNAWREIQSEIHYDGLAEGLIPIPPNVADPFFAIAGRMVFKGAIRALGGDNKRT
NAALYKAIAHSNLEELHAILANESAATYVDPVTERTGMSLKMTVQNQLDCFRYLHDEGEP
FSIREWIQNEDEDDDSWLFITVNEEQKTALLPLISLWCDIAIRSLLTLKPIHRERLWYFY
DELPTLQKLEIMKLAVTNIRKYGGCFVLGIQDFSQLFQIYGEHLARTIISGCQTKLLLRV
TDGDAAKALANAIGQADLDEKEESLNLGIDERRDGMSVFARRNLRDLVLSSEILHLPDMQ
GYLVTPSDYPVARVKYEYVPHPQTVTPFIPRQTYDLWLPAGAAADRPAAPERQSTALPSP
PSPTARFGSDPSPSHSPSPNPSGAPTTAAEDSATNAASAGPAVGAPAPNTSGCVARPSNV
ISLSTGEIVDGDTGEVHSTSAPREPVTGERPTGRAGLGDLLG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaacgctcccccagcggactcgccaccttttcacgaggaactgccctctgg
tggcaacaggcaaagcttctcaccagtgcgatcgtggcggttgtcatcgcggcaattctc
gtcggtgcgctggccggcggtgcatacctgtatttcgtcacgtccgccgaaactcgctat
ttgacgatcaagcacgtggaggcggaaatcctcacagtcgttccgatggccaatccgaac
gtctcgttccacctcggcaacgacgacacggcactgccgcccgctgcggcgctgtcgttt
accgaggatgcggccgacgagttcttcatctatgcgcgcaatgctgccctgtacgctgtt
ttaaccgctattgccgtcacgttcctttccgtcctgttttggatggagtacggccgcgga
aaacttaccgacaagcaggtgcgcggtgccaagctcgtcaaagcaaaggagctcatcaag
gaactggaggctcgagacgacgccagcccctatcgcatcgccggcgtgccgatgcggaag
aaggccgaagtgctcggcacactcttttctggtgcccaaggcagtggcaagtcccagcag
ttttttgcgctgatggatcaggtgcgcgcccgcaaaaaacgggcgatcgtctatgaccca
tcaggcgaattcaccgctgcgtattaccgcgaagggaaggacgtcatcctgaatccgctc
gacgcgcgtagcccgaactggaatgcctggcgcgaaatccaaagcgagatccattacgac
gggctggctgaggggctcatcccgattccaccgaatgtcgccgacccattcttcgcgatt
gcggggcgcatggttttcaagggagcgattcgtgcgcttggcggcgacaacaaacgaacc
aacgcagcgctgtacaaggccatcgcccatagcaatctcgaggaattgcacgcgatccta
gcgaacgagtctgcggcgacctacgtcgatccagtcactgagcgtacgggcatgagcctc
aagatgaccgtgcagaaccagctcgattgctttcgttacctgcacgacgaaggcgagcca
ttttcgatccgagaatggatccagaatgaggatgaagacgacgattcctggctgttcatt
accgtcaacgaggagcagaaaaccgccctgcttccgctcatcagcctctggtgtgatatc
gctatccggtcgctgctgacgctcaagccgattcatcgcgaacgtctctggtacttctac
gacgagctccccactctgcaaaagctcgagatcatgaagctcgccgttaccaacattcgg
aagtacggcggttgcttcgtactcggcatccaggacttttcccaactcttccagatctac
ggcgagcacttggcgcgcacgatcatctccggatgccagaccaagctcctgttgcgcgtg
accgatggtgacgcggccaaggcattggccaacgcgatcggtcaggccgacctcgacgaa
aaggaggaaagcctgaatctcggcatcgacgagcggcgcgacggcatgagcgtttttgcg
cgacgcaatctccgcgatctcgtcctctcatcagaaattctgcacctgcccgacatgcag
ggctatctggtcacgccgagcgactatccggttgcccgggtcaagtacgagtacgtcccc
catccccaaacggtgacgcccttcatcccgcgccaaacgtacgatctctggcttccggca
ggcgctgcagctgaccgtccggctgcgccggagagacaatcgactgcgctaccttccccg
cccagcccgacggcgaggttcggcagcgacccgtccccgtcccactccccgtcacccaat
ccttccggcgcaccgaccacggccgccgaggattcggcgaccaacgccgcttcggccggt
ccggctgtcggtgcccccgcgccgaacacttctggctgcgtagcacgaccgtccaatgtg
atctcgctgtcgactggcgaaatcgtcgacggtgacaccggcgaagttcacagtacgtcg
gctccccgcgagccagtcaccggcgaacggcccaccggccgcgccggtctcggcgacttg
ttggggtga
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