Borreliella chilensis: OY14_01130
Help
Entry
OY14_01130 CDS
T03543
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bchi
Borreliella chilensis
Pathway
bchi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bchi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OY14_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchi03021
]
OY14_01130
03019 Messenger RNA biogenesis [BR:
bchi03019
]
OY14_01130
Transcription machinery [BR:
bchi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OY14_01130
Messenger RNA biogenesis [BR:
bchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OY14_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
DUF1269
AAA_25
AAA_18
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AJA90060
UniProt:
A0A0A7UVJ5
LinkDB
All DBs
Position
complement(233927..235474)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNVGFDLESEIRRLDISKEFKLEDNLKKKVIKVVAKKGSASNVAKSADLSDVKDSNN
VVFPEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKVVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEALVEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatgttggatttgatttagaaagtgagataaggcggttagatatttct
aaagaatttaagcttgaagataatttaaagaaaaaagtgattaaagttgttgctaaaaag
ggttctgcatctaatgtggcaaaatctgcagatttaagtgatgtaaaagattcaaacaat
gtagtgttccctgaatttgattatgatattcctgcttcaggtttagaaaataatattaaa
accttagagcaaagtaatattattaagttttttaatggtaaagattacgtagagattgaa
aagctttatgacaagccgattacagaggttagaaaagttgttgaaggtcttggaactaac
catactattgctgtaacaatgaaaaaaaccgagttaatatttttattggtaaaaatatta
agtgagaataatattaatgttttgtttacgggtgtgcttgacgtacttagtgatggttat
gggtttttgagaactgcttcaaattcttatctttcagggggtaatgatgtttatgtttct
ccttctcagattagactttttaatttaagaacaggtgatattttgtatggtcaaattaga
tcgcctagagatggcgagagattttttgccatggttaaaattaaatccatcaatgatcaa
gatcctacatttgctcaaaatagaataccttttgataatttaacccctctttatcctaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaagacttattaatcttttt
tcacctataggtaagggacaaagagctttaatagtttctcccccaaaagcgggaaagacc
actttgcttcaaaaaatagctaatgcaataactactaattattcggatgttattttgatg
atattacttattgatgaaaggccagaagaagttacagatatgatccgcagtgttaaaggc
gaagtaattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagaaatg
gttattgaaaaggcaaaaagacttgttgagaataaaaaagatgttgttattttgcttgat
tctattacgaggcttgcaagggcatataatcagactatgccaacttctggtaaaatttta
tcaggtggagtagattctaatgctcttcataaaccaaaaaggttttttggatctgctaga
aatattgaggaagggggaagtttaactattatagctactgctttggttgatactggtagt
aaaatggatgaagtaatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagacttttccctgctattaatattaaaaaatcaggtact
agaaaagaagagctattgcttagtgaagaggagcgttctaagattttgcttattagaaga
atacttggaggtgttgatgattatgagggagttgaagctctagtagaaaaaatgaaaaaa
agcaaaaataatgaaatctttttaaagacaatgagcaatggcaattaa
DBGET
integrated database retrieval system
