Borreliella chilensis: OY14_01900
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Entry
OY14_01900 CDS
T03543
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bchi
Borreliella chilensis
Pathway
bchi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bchi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OY14_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchi03021
]
OY14_01900
03400 DNA repair and recombination proteins [BR:
bchi03400
]
OY14_01900
Enzymes [BR:
bchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OY14_01900
Transcription machinery [BR:
bchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OY14_01900
DNA repair and recombination proteins [BR:
bchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OY14_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AJA90209
UniProt:
A0A0A7UVG2
LinkDB
All DBs
Position
complement(395920..400053)
Genome browser
AA seq
1377 aa
AA seq
DB search
MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWEC
YCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDI
TASSLNSILYYEKYVVIEPGDTDLKKMQLLSEDEYIEARERYGMSFNASMGAEAIKTLLE
NLDLDELSSKLRVQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMDVLPVIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAK
MALELFKPFVVRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPAAQAESWALMLSTNNLL
NPANGHPIVFPSQDIVLGLYYLTMEKKNVVGEGKKFLNFNNVILAVNNRSLDYNASIYVK
IDGEYKKTTAGRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIVKE
LGFRYATRFGCTISMSDIIVPNEKRAYVERANKEIAKIQNDYAKGVITGEERYNNVVSVW
LKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIEL
PIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRTEDCGTI
NGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDVNEEISETKIELLEKIGI
EKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNGIEGFNVKVDNGILFTRKGTLKIINVFYDEKIKNIKEI
KVLDSQRVIKGIPLFVNKNGVEIFSSYIGYVKLRDDNFFIVSEEQEVVLKAGTKLEIGVG
DYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFES
LDPRIFIVDSSGMEVASYVLPGDAYLQVEDGQNINIGDVVAKLSKGSEKTQDITGGLPRV
NDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVRAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMK
KVKIVAVGDTNFVYGQKVDKHAFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISA
ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVRENVDSEV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagataaaagattttgaaagaataaaaattaaaatagcatctcctgatcaaatt
agaaattggtcttatggagaggttaaaaagtctgagactattaattatagaactttgaga
cccgaaaaggatggacttttttgtgagaggatttttggtactacaaaggaatgggaatgt
tattgtggaaaatttaaatcagttagatataagggtattatttgcgatcgttgtaatgta
gaggttactcattttaaggtgagacgcgagagaatggggcatattgagttagcagctcca
gttgctcatatttggtattacaagtatataccctctagaattgggcttttgcttgatatt
acggcgtctagtttgaattctattctttattatgaaaaatatgtggtaattgaaccaggt
gataccgatcttaaaaaaatgcaacttttaagtgaggatgagtacatagaggctagagag
cgatatggaatgtcttttaatgcttctatgggagctgaagctattaaaactcttcttgaa
aatcttgatcttgatgagctttcttctaaacttagggttcaaatgatagataaagatgac
aaaactgataagaaactgttaagacgtcttgaaattattgaaaattttaaaatttctggg
aataagccagaatggatgattatggacgttcttcctgttatacctccagaaattaggcca
atggtgcagcttgatggaggccgttttgcaacatctgatcttaatgatctttatagaaga
gttataaataggaataatcgtttaagaaagttgcttcttctgaatgcaccagagattatt
gtaagaaatgaaaaaagaatgcttcaagaatcggtagactctctttttgataattctcat
aaaagaaaggttgttaaaggttcgtctagcagaccccttaagtctctttctgatgcatta
aagggtaaacagggaagatttagacaaaatcttcttggtaaaagagtagattattctggt
cgttctgttattgttgttgggcctgaattaaaactgcatcaatgtgggttgcctgcaaag
atggctcttgagctgtttaagccttttgtagtaagaaggttaattgagagtgaagcagtt
tttaatatcaaaagagcaaaaaatttaattgaacaagaagttgatgaagtatggcaaatt
ttagatcttgttattaaagagcaccccattcttttaaatagggcgcctactcttcatagg
cttggaattcaagcctttgagccggttttagttgagggtaaggcaataaaattgcatcct
cttgtttgtcatgcctataatgctgattttgatggtgaccagatggcagtgcatgtgccc
cttactccagcagcacaagctgaaagttgggctttaatgctttcaacgaataatctttta
aatcctgctaatgggcatcctattgttttcccatctcaagatattgttttgggtttatat
tatttaacaatggaaaaaaagaatgttgttggagaaggtaaaaagtttttaaactttaat
aatgttattcttgctgtaaataataggagtttagattacaatgcttctatttatgttaaa
atcgatggtgaatacaaaaagaccacagctggtagggtaatatttaatgaggctttgcct
aatgggattgaatttgtaaataaaactcttagtgatttggagttgcaaattttgatatca
aaagtttatgtggttcatggttcttccactgtaattgaaatgcttgatattgtcaaggaa
ctaggttttaggtatgctactaggtttgggtgcacaattagtatgagtgatattattgtt
cctaatgaaaagagggcttatgtggaaagagctaataaagagattgctaaaattcaaaat
gattatgctaagggtgttattactggtgaagagcgttataacaatgtagtttctgtttgg
ttaaagacaaatgaagagcttactaataagatgatggaaattttaaaaaaagacagagat
ggatttaatgttatttatatgatggcagattctggtgctaggggcagtagaaatcaaata
aggcaacttgctggtatgagaggattgatggcaaaaacttctggagatattattgagctt
ccaattatttccaactttaaagaaggtctttctgtgatagagttttttatatctacaaat
ggagcaagaaaaggtttagcagatactgctcttaagacagctgatgctggatatttaact
cgaagattagtagatattgcccaagatgttgttgttagaacagaagattgtgggactata
aatggaataaaagttgaaactgtaaaaaatggtgaggaaatattagaatctttgaaagaa
aaagctgttgggagttattctattgaaagaataaaaaatccaattaccggtgagattgtt
ttagacgtaaatgaagaaatctcagaaactaaaatagaattattagaaaaaattggtatt
gaaaaacttgttattagatctgttttaacatgtgaagctgaacacggtgtttgtcaaaaa
tgttatgggagagacttttcaaaaaacaagcctgttaacattggtgaggctgtaggaata
attgctgctcagtccatagggcaaccaggaactcaattgaccatgagaacttttcatatt
ggtggtgttgctcaggctggcagtgaggatgataaaatatctttaaagaatgcctttata
ttgaatggaatagagggttttaatgttaaggttgataatggaattctttttacaaggaaa
ggaactttaaaaataattaatgttttttatgatgaaaaaatcaagaacataaaagaaatt
aaagttttagattctcaaagggtgatcaaaggaattcctttgtttgttaataaaaatggt
gtggagattttctcttcttatattggttatgttaaattaagagacgataattttttcata
gtatcagaagaacaagaagttgtcttgaaagctggtacaaagctcgaaattggggttggc
gattatgttgaatcggggaaagttatcggcacatttgatccatttgcagaacctattatt
gcagaggttaagggaaaaattaaatttaaggatattattttaggaactactcttaaagaa
gaaataaatactgaaacaggtaatgttgagaaaagaattacagacaatgtttttgaatct
cttgatccgagaatttttatcgttgatagtagtggtatggaggttgcatcttatgtattg
ccaggggatgcttatcttcaagttgaagatggtcaaaatattaatataggggatgttgtt
gctaaactttccaagggttctgaaaaaacacaagacattacaggaggattgcctcgtgtt
aatgatctttttgaaacgagaatacctaaaaatttgactgaaatggctaaagtaagtggc
attgttcaatttaaatcaattcaaaaaggtaaaagacttattaatattttagatgagtat
ggagttgagcataagcattatattccagctggcaaacatcttttggttagagatggagat
gttgttagagcaggagatatgctttgtgatggtaggattaatcctcatgatgtgcttgaa
attttaggtgggattagtttgcaagagtttcttttggcagaaattcaggatgtttatcgt
aaacaaggtgttagtattaatgacaaacatattggtgtaataatcaaacaaatgatgaaa
aaggttaagattgtggcagttggtgatactaattttgtttatgggcaaaaggtagataag
catgctttttatgagcaaaatagaaaagtaattgaacaaggcggtgagccagcaatagca
agtcctattcttataggagttactaagacatctcttaatatagattcttttatttctgca
gcttctttccaggagacaacaaaagtactaacagatgcttctattgctgggaaaatagat
gatcttagaggattgaaagaaaatgttgtaattggtcatttaattcctactggaactggt
atgggtctttataaaaaaattaaagttagggaaaatgtcgattctgaagtttaa
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