Borreliella chilensis: OY14_03565
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Entry
OY14_03565 CDS
T03543
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bchi
Borreliella chilensis
Pathway
bchi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bchi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OY14_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchi03021
]
OY14_03565
Transcription machinery [BR:
bchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OY14_03565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AJA90497
UniProt:
A0A0A7V2Q8
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All DBs
Position
745428..747320
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AA seq
630 aa
AA seq
DB search
MPDLEKKYLELIEGIIAHLANRKSLSFSELSNLLPDDILEPETLDCICTVLEDRGIRLVN
KAPELDVVGTEDEGNEEEEMDIESGRNFMILDDGFQSDADIDIDDKLDDCDEDIISVKDD
LGSGYVKNNVFKDTHSEDPIKLYLKEIGKEFLLTGNQEVELAKQMDSGESIIENILKNDG
LVIENYYNLVNVIYSRMEREEFFKREKDKDKESNPDYYNKKKRIASFYKIPLKPIQDRLI
SYVDNKHRVYELGGDIFEKNLKRERLALKELLRDIPLYQDELRIFSDDYIDSANKIKDLQ
RQQRMILSRLKIEKIRDLRVLGRDLTIAEKRIEIEKSLKLKEDTIKEQITEAQLAQKELE
RIEMYYEYPMDKIISMSEEIAKGKQMMQHAKDQLIKANLRLVVSIAKKYANRGLHFFDLV
QEGNIGLIKAVEKFEYKRGFKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINRLNR
ETRYLIQVLGKDPTDEELSDRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIED
KAIKNPANHTSFVVLQDQIRAILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
ttgccggatttggaaaagaaatatttggaactgatagaaggaattattgctcatttagcg
aatagaaaatctcttagttttagtgaattatcaaatttacttcccgatgacatattagaa
ccagagactcttgattgtatttgtacagtacttgaggataggggaataaggttggttaat
aaagctccagaattagatgtggttggcaccgaagatgagggtaatgaagaggaagagatg
gacattgaatctggtagaaattttatgattctagatgatggtttccaaagtgacgctgat
attgatattgatgacaagttggatgattgtgatgaagatattatttctgttaaagacgat
ttgggttcagggtatgttaaaaacaatgtttttaaagatacccattcagaagatccaata
aagctttatttgaaagaaatagggaaagagttcttattgacaggcaatcaagaagttgaa
cttgcaaaacagatggattctggagagagtataattgaaaatattctcaaaaatgacgga
cttgttatagaaaactattacaatcttgttaatgttatttattcaagaatggaaagggaa
gagttttttaaaagagaaaaggataaggataaagagagtaatccggattattataataaa
aaaaaaagaattgcttctttttacaagattcctttaaagccaattcaagatcgtttaata
agctatgtagataataaacatagagtatatgagcttgggggggatatttttgaaaaaaat
ttaaaaagggaaaggttagccttaaaagagcttttacgagacattcctttatatcaagat
gaactgaggattttttcagatgattatattgattctgctaacaaaataaaagatttgcaa
agacagcaaagaatgattctgagcaggttgaaaatagaaaaaataagagatcttagagtg
cttgggagagatttaactattgccgagaaaagaatagaaatagaaaaatctcttaaactt
aaagaagataccattaaggagcagatcacagaggctcaactcgctcaaaaagaacttgag
agaattgaaatgtattatgaatatccaatggataagataataagcatgtcagaagagatt
gctaaaggcaagcaaatgatgcagcatgctaaggatcagttgattaaggcaaatttaagg
cttgttgtaagcattgccaagaaatatgcaaatagaggtcttcatttttttgaccttgtt
caagaaggtaatattggattaattaaggctgttgaaaagtttgaatataagcggggcttt
aagttttcaacttacgctacttggtggattagacaagctataacaagatctatttctgac
caagctcgtacaattagagttcctgtgcacatgatcgaacaaataaataggcttaataga
gaaactagatatttgattcaagttttaggaaaggatcctacagatgaagagctctcagat
agacttggatgggagcttaaaaaggttaaaactgtaaaaagtgtttcaagagagcctgtt
tctcttgaaacaccaattggagaagaagaagattctgttcttagtgattttattgaggat
aaggcaataaaaaatcctgcaaatcatacatcttttgtagttttgcaagatcaaataaga
gcaattcttgggactcttcctgaaagagagcaggaagttgtaaaaatgagatttggcctt
gaagatggttattctttaactcttgaagaggttggacttcattttaatgttacaagagaa
agaatcagacaaattgaatctaaggcattaaggcgccttaaaaatcccaaaaaaactcaa
aaattaaaagattatcttgaagatttaaattga
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