Borreliella chilensis: OY14_04040
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Entry
OY14_04040 CDS
T03543
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bchi
Borreliella chilensis
Pathway
bchi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bchi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OY14_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bchi03019
]
OY14_04040
03016 Transfer RNA biogenesis [BR:
bchi03016
]
OY14_04040
Enzymes [BR:
bchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OY14_04040
Messenger RNA biogenesis [BR:
bchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OY14_04040
Transfer RNA biogenesis [BR:
bchi03016
]
Prokaryotic type
tRNA degradation factors
OY14_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AJA90581
UniProt:
A0A0A7UWH0
LinkDB
All DBs
Position
846110..848278
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AA seq
722 aa
AA seq
DB search
MRKILKLKIGRDELVLETGFMAKQANGSVLATYGGSSVLATVCCSTNVREDLDFVPLSVE
YNEKYYAAGKIPGGFIKREGKPKDKEILVSRLIDRPMRPLFDKRFGREIQVIPTTLATDQ
LNPPDIVGMNAAFTAVFLSDIPFNGPIAAVRMVYLNGKFIVNPSFEEIHDSDLDIVVAGS
LNGITMVEGGANEVSEDILLSAIDSAHEYIKQICNAQKEFLNIVGEKEKLPLAFEEKIFE
FKEELRDFVYADLKEACFVKGKLNRDKAITLLRNKSYEHFSSLEKLTDSNESLFHKAFDD
FEKEIVRSSILNNKIRTDGRAPNEIRDILAEVDILSRTHGSALFTRGETQALAVTTLGTS
IDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRALESIVPGKND
FPYTIRVVSEVLESNGSSSMATVCAGSMSLMTAGVPVKRQVAGIAMGLVSEGEKYVVLSD
ILGEEDHLGDMDFKVAGTENGITGFQMDIKIENVTKQLMRDALEQARLGRIHILSIMNSV
ISNSRVGISEYAPKIVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNGKIILFGA
DDFKMQKAKEKIESIVREPKVGEIYEGVVKKINSFGAFIELTPAKEGFLSTRLKSRDSRY
GSGRFGDSNNRYSRFGSGDNRRGNVGLVRPPKLEEGQRIKVRIIDIDKFGKIDLEIVKDK
DY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaaattttaaaactaaaaataggaagagacgagttagtgcttgagacgggattt
atggcgaagcaggctaatggatcggttcttgcaacttatgggggatcttcagttcttgcg
actgtttgttgttcaactaacgtgagagaagatttagattttgttcccctttctgttgaa
tataatgagaaatattatgcagctggtaagattccaggaggatttatcaaaagagaagga
aagccaaaagataaagaaatacttgtttctagattaatagatagaccaatgagacctctt
tttgataaaagatttggtcgagaaattcaagtaattcctacaactttggctacagatcag
ctcaatccccctgatattgttggaatgaatgctgcttttacagcagtttttttgtcagat
attccatttaatggtccgattgcggctgttagaatggtgtatttaaatggtaagtttata
gtaaatccttcgtttgaagaaattcatgattctgatcttgatattgttgttgcaggaagt
ttaaatggaattacaatggtagaaggcggtgctaatgaggttagtgaggatattttgctt
tcagcaatagacagtgcacatgaatacattaagcaaatttgtaatgctcaaaaagagttt
ttaaatatcgtaggggaaaaggaaaaacttcctttagcttttgaagaaaaaatatttgaa
tttaaagaagagcttagagattttgtttatgctgaccttaaagaagcttgctttgttaag
gggaagcttaatagagataaagctataactttgttgcgaaataaatcttatgaacatttt
tcttctcttgagaaattgactgatagtaatgagtcgctttttcataaagcttttgatgat
tttgagaaggagattgttagaagctctattcttaataataagattagaacggatggtcgg
gctcctaatgaaataagagatattcttgcagaagttgatattttaagcagaacacatgga
tctgcactttttacaagaggggaaacacaggctttagctgtaactactcttggtacaagt
attgatgagcaaataatggatgatattgatggtgataagcgccttaattttatgcttcat
tataattttcctccattttcagttggtgagactggtagacttatgactggtaggcgcgag
attggccatggtcatttagctcaaagagctttagagtccattgttcctggaaaaaacgat
tttccttatactattagagtagtttctgaggttttagagtccaacggatcttcttcaatg
gctactgtttgtgctggaagtatgtctttgatgaccgcaggggttcctgttaaaaggcaa
gttgcagggatagccatggggcttgttagtgaaggtgaaaagtatgtggttttaagtgat
attcttggggaagaagatcacttaggtgatatggactttaaagtggctggcacagaaaat
ggaattactggatttcaaatggatattaaaattgaaaatgttactaagcaattaatgaga
gatgctcttgagcaggctagattgggcagaattcacatcctttctattatgaattctgta
atttcaaattcaagagttggtatatctgaatatgctccaaaaattgttcaactacaaatt
gatattgacaagatatctcttgtaataggatctactggaaaaacagttaaggccataaca
gatgaatttgaagttaaggttcaaattgagcaaaatgggaaaattattctttttggtgct
gatgattttaagatgcaaaaggctaaggaaaaaatagagagtattgtaagggagccgaag
gtcggtgaaatttatgaaggggtcgttaaaaagattaatagttttggggcttttattgaa
cttactcctgcaaaggaaggatttttaagtactcgattgaaatctagagatagtaggtat
ggttctggaaggtttggagattctaataatagatattctagatttggtagtggagataat
agaagaggtaatgtagggctagttcgtcctccaaaattagaagaaggtcagcgaattaaa
gttagaataattgatatagataaatttggaaaaattgatcttgaaattgttaaagataaa
gattattaa
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