Bifidobacterium choerinum: BcFMB_00830
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Entry
BcFMB_00830 CDS
T05748
Name
(GenBank) AAA family ATPase
Organism
bcho
Bifidobacterium choerinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
fn3
Cadherin_4
Pur_ac_phosph_N
Big_2
Bact_surface_Ig-like
CARDS-D2_trefoil
Trep_Strep
DUF5989
Motif
Other DBs
NCBI-ProteinID:
ATU19716
UniProt:
A0A2D3D4D7
LinkDB
All DBs
Position
209971..215958
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AA seq
1995 aa
AA seq
DB search
MKLNGKRTNDGYERDMRRKERLQAIMRTGRRPWLVPLVCLLAVLAVIIGAFIVSSVTERH
LKLDDGTVWVTALNEGKAARYNVALKEPDVAVMASGARFDVAQADGVTMLDEDASTASID
QATISMSDSTPTKNGIHTYVGGDTVAMFDAQRGDVWVGDAADVKSIRPVDSDPTMRLGVG
GKVAVMHDGAVYGYRPRDAKVLAVDPAESMDPREVTSLADGAQSADSFTVVGDHPVIASG
DRLIWDKGGSAEFKDAGPLVLQAPSADAEQDDWVAAGAQSGLALVDLSSKSGDPRLLSSG
AKGEPAQPVSLGGCVRGAWAQKAHNAIKVCSADADVQFKTLEAIDGTSQLVYRVNHRHAV
LNDVFNGNLWNPDVDTSVIKIQWKKLETKQESREQNNDESTNSKRNFEKQCSSKSGQIKA
ADDEFGARVGSHQILDVLRNDEQTDCSVLRITSVSAPKNSSITVSPIYDGRYLQLNAADA
STGTATFTYEISDGRDQTSSATVTLKFESNSGNHAPRQVETPEQIDVEQGASYTGNALGG
FADADGDPLTLVDAHVENTEEATVSTRADGQLTFNAGSMNSGRATVKLTVSDGKETATGT
MYFAVRPAHTLPASIDPVVRKTTPNTPTQIDLKPYVHGTSADPVKISDVEAPDKTTATPH
PSDMGFTFTAQQTGTYYVSYTATQGTIPATGLVRVEVEAMTKDEARPIAANDVALLGADN
TAIVEPLTNDVDPLGGVLSVTDVKAPADSSIKTGIVSNKRVYLTAMQLPTAPVEIEYTVA
NAAGSSTGTIVLQPPALSGASSAPKASNVDVSVRTGGIVSVDVPAHVTYADGTTITLSNK
LQYDTGTFKGLVFVASDIVRYQAPSDPGSYPVTYTVTDTLGNSASATITFNVHRADADAK
AAASPKDVEAQVAAGQKIRIPITLRGIDNDGDDVQLLGLGNTVPQLGRISEVGADYLVYE
AYEDSAGTDEFSYAVEDWTGRRAQANVRVGIFKSGANSSVYARDDTVTLRPNTATTVPVL
LNDVASDDSKLTVDDKLETQGVTDAKVTNDMVSFTTPSTAGTGYIVYTIENKAGISDRAT
LTVNVDPKAPIEPPTAYDYHVPAIATIDKRSVDVDVSKFIANPSGSSDVLAVDVDKSARD
HAHMASGKPTTISIDLTDEARAVPYTVTNTEHDITSTAFIMVPAYGVFPPQLRPKAPPLN
VNAGSSITINIADYVRVGVGKTAVVEKDSVSATKAANDDLYVNDQTLKFTAAKDYGGPAS
ITFTVTDGKREGKGNVKIVNSSVITLPITVIGHEMPAPTFSSTTVDVVAGESPTTINLRE
LTHTTESDEDAKFKYSGGTNSGGITASVTADGKLTVSAETTAKPGATASVPISIAYGSNG
GVVQAGVTARVTASTRPLARVNGTTTRIKAGETKHVDVLADAYNPFPDSPLKIVSASSDG
GGKLSVSVDGSRIAVTAAKDIGASSTRVLVTVGDATGSADRQVTATYTFSVVDRPGAPIL
FPITGPKQDGAVTLSWTPGDANGSPITDYEVSWDGGKKLCGAVTSCQITGLKNGTDYMFT
VRAQNEVGWSDSSHAEKGTPDKTPEAPEVHADGGHNEITATWSLPAKSTGSSTTAFYVSL
DDGAPEKVGPSTTKKTFRFEDIPNDGETHVVTVQAENKAGMGEVGRSKSIQVYGDVDKPV
VDAKHDGDKVKVSVSVANWHGAGCTSIDVSLNGQTKPVACPGGSTSFDVQDSMYFNTYSA
TATVHPSKGSAVSAESKPVEIGVNQEKPDVSVHLNGSICEYAWAAKGKADAMQVSYADKT
STALSGKDSIPAKPWKLCPAITAHSSFKNHPGPESSAAGDVVYEVPAKVGDWNQVSVMWN
PSERNEIIIDMNGQVDSYGEKTDYFVTLNGQPAPIVTNGGRITVKADDHTPDDSNVRITI
KIGSKETSQDKHVTGTRKEAEKKEEDKPSDQPNPSESPDAHPSAFLLPGTHWGRMPTFWL
GTNQPLPASRSLLFR
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgggaagcggacgaacgacggatacgagcgcgacatgcggcgcaaggaa
cggctgcaggcgatcatgcgcaccggcaggaggccgtggctcgtgccgctcgtgtgcctg
ctcgccgtgctcgccgtcatcatcggcgcgttcatcgtcagctcggtcaccgaacgccat
ctcaagctcgacgacggcaccgtgtgggtgacggcgctcaacgagggcaaggcggcgcgc
tacaacgtggcgctcaaggagccggatgtggccgtcatggcctccggcgcgcggttcgac
gtcgcgcaggcggacggcgtcacgatgctcgacgaggacgcgtcgacggcgtcgatcgac
caggcgacgatctcgatgtccgactcgacgccgacgaagaacggcatccacacctatgtg
ggcggcgacaccgtcgcgatgttcgacgcgcagcgcggcgacgtctgggtcggcgacgcc
gccgacgtcaaatcgatccgccccgtcgacagcgacccgacgatgaggctcggcgtcggc
ggcaaggtcgccgtcatgcacgacggcgccgtctacggctaccgtccgcgcgacgcgaag
gtgctcgccgtcgacccggccgagtcgatggacccgcgcgaggtcacgtcgctcgccgac
ggcgcgcagtccgccgactcgttcaccgtcgtcggcgaccatccggtcatcgcctccggc
gaccgtctcatctgggacaagggcggcagcgccgaattcaaggacgccggcccgctcgtg
ctgcaggcgccgagcgccgacgccgagcaggacgactgggtcgccgccggcgcgcagagc
ggcctggcgctcgtcgacctctcgtcgaagagcggcgatccgcgcctgctgagctcgggc
gccaagggcgagccggcgcagccggtctcgctcggcggctgcgtgcgcggcgcatgggcg
cagaaggcgcacaacgcgatcaaggtgtgctcggccgacgccgacgtgcagttcaagacg
ctcgaggcgatcgacggcacgtcgcagctcgtctaccgcgtcaaccaccgccacgccgtg
ctcaacgacgtgttcaacggcaacctgtggaacccggacgtcgacacgagcgtcatcaag
atccagtggaagaagctcgagacgaagcaggaaagccgcgagcagaacaacgacgagtcg
acgaacagcaaacgcaacttcgagaagcagtgctcgtcgaagtccggccagatcaaggcg
gcggacgatgagttcggcgcgcgcgtcggctcccaccagatcctcgacgtgctcaggaac
gacgagcagaccgactgctcggtgctgcgcatcacgtcggtgagcgcgccgaagaacagc
tcgatcaccgtctcgccgatctacgacggccgctatctgcagctcaacgccgccgacgcg
tcgaccggcacggcgaccttcacctacgagatcagcgacggccgcgaccagacgagctcg
gcgacggtcacgctcaagttcgaatcgaactccggcaaccatgcgccccgccaggtcgag
acgcccgagcagatcgacgtcgagcagggcgcgagctacaccggcaacgcgctcggcggc
ttcgccgacgcggacggcgacccgctcacgctcgtcgacgcgcatgtcgagaacaccgag
gaggccaccgtctcgacgcgcgccgacggccagctcacgttcaacgccggctcgatgaac
tcgggacgcgcgaccgtcaagctcaccgtctccgacggcaaggagacggccaccggcacg
atgtacttcgcggtgcgcccggcgcatacgctgccggcgagcatcgacccggtcgtcagg
aagacgacgccgaacacaccgacgcagatcgacctcaagccctacgtgcacggcacctcc
gccgacccggtcaagatcagcgacgtcgaggccccggacaagacgacggccacgccgcac
ccctcggacatgggcttcacgttcacggcgcagcagaccggcacctactacgtgtcctac
acggccacgcagggcacgatcccggcgaccggcctcgtgcgcgtcgaagtcgaggcgatg
acgaaggacgaggcgcgcccgatcgccgcgaacgacgtcgcattgctcggcgccgacaac
acggcgatcgtcgagccgctgacgaacgacgtcgacccgctcggcggcgtcctgtcggtg
accgacgtcaaggcgccggccgattcgagcatcaagaccggcatcgtctcgaacaagcgc
gtctacctgacggcgatgcagctaccgacggcacccgtcgagatcgaatacacggtcgcg
aacgcggccggctcgtcgaccggcacgatcgtgctgcagccgccggcgctctccggcgcg
agcagcgcgccgaaggcgagcaacgtcgacgtctcggtgcgcaccggcggcatcgtctcc
gtcgacgtgcccgcccatgtgacctatgcggacggcacgacgatcacgttgagcaacaag
ctgcagtacgacacgggcacgttcaagggactcgtgttcgtcgcctccgacatcgtgcgc
taccaggcgccctccgatccgggctcctatccggtgacctacaccgtcaccgacacgctc
ggcaacagcgcgtccgcgacgatcacgttcaacgtccaccgcgccgacgccgacgcgaag
gccgcggccagcccgaaggacgtcgaggcgcaggttgccgccggccagaagatccgcatc
ccgatcacgctgcgcggcatcgacaacgacggcgacgacgtgcagctgctcggcctgggc
aacacggtgccgcagctcggccgcatcagcgaggtcggcgccgactacctcgtctacgag
gcgtacgaggattcggcgggcaccgacgagttcagctacgccgtcgaggactggaccgga
cggcgcgcccaggcgaacgtgcgcgtcggcatcttcaagagcggcgcgaactcgagcgtc
tacgcgcgcgacgacacggtgacgctgcgtccgaacacggcgacgacggtgccggtgctg
ctcaacgacgtcgcgagcgacgacagcaagctcaccgtcgacgacaagctcgagacgcag
ggcgtcaccgacgcgaaggtgacgaacgacatggtctcgttcacgacgccgtcgacggcc
ggcaccggctacatcgtctacacgatcgagaacaaggccggcatctccgaccgcgcgacg
ctcaccgtcaacgtcgacccgaaggcgccgatcgagccgccgaccgcatacgactaccat
gtgccggcgatcgcgacgatcgacaagcgctcggtcgacgtcgacgtctcgaagttcatc
gcgaacccctccggctcgagcgacgtgctcgccgtcgacgtcgacaagtcagcgcgcgac
cacgcgcacatggcgtccggcaagccgacgacgatctcgatcgacctgaccgacgaggcg
cgcgccgtgccgtacacggtcacgaacaccgagcacgacatcacgtcgacggccttcatc
atggtgcccgcctacggcgtcttcccgccgcagctgcgcccgaaggcgccgccgctcaac
gtcaacgccggctcgtcgatcacgatcaacatcgccgactacgtgcgcgtcggcgtcggc
aagacggccgtcgtcgagaaggactcggtcagcgcgacgaaggccgcgaacgacgacctc
tacgtcaacgaccagacgctcaagttcacggcggcgaaggactacggcggccccgcgtcg
atcacgttcacggtgaccgacggcaagcgcgagggcaagggcaacgtcaagatcgtcaat
tcgtcggtcatcacactgccgatcaccgtcatcggccatgagatgccggcgccgacattc
tcgtcgacgaccgtcgacgtcgtcgccggcgaaagcccgacgacgatcaacctgcgcgag
ctgacgcacacgaccgaatccgatgaggacgcgaagttcaagtattcgggaggcacgaac
tccggcggcatcacggcgagcgtcaccgccgacggcaagctcaccgtgagcgccgagacg
acggcgaagccgggcgcgacggcgtcggtgccgatctcgatcgcctacggcagcaacggc
ggcgtcgtgcaggcgggcgtcaccgcgcgcgtgacggcgtcgacgcggccgctcgcgcgc
gtcaacggcacgacgacgcggatcaaggccggcgagacgaagcatgtcgatgtgctcgcc
gacgcctacaacccgttccccgattcgccgctcaagatcgtctccgcgtcctccgacggc
ggcggcaagctgtccgtgtcggtcgacggctcccggatcgcggtgacggcggcgaaggac
atcggcgcatcgtcgacgcgcgtcctcgtgacggtcggcgacgcgaccggcagcgccgac
cgtcaggtgacggccacctacacgttctcggtcgtcgacaggccgggagcgccgatcctg
ttcccgatcacgggaccgaagcaggacggcgccgtgacattgtcgtggacgccgggcgac
gcaaacggcagcccgatcactgactacgaagtcagctgggacggcggcaagaagttgtgc
ggcgccgtgacttcgtgtcagatcaccggtctgaagaacggcaccgactatatgttcacc
gtgcgtgcacagaacgaggtcggttggtccgacagctcacatgccgaaaagggcacaccg
gacaagacgccggaagcccccgaggtgcacgccgacggtggtcataacgagatcaccgcg
acttggagcctgccggcgaaatccaccggatcgtcgacgaccgccttctacgtgtcactc
gatgatggagccccggaaaaggtggggccctccacgacgaagaagaccttccgcttcgag
gacatccccaatgacggcgaaacccatgtcgtcaccgtgcaggccgagaacaaagccggc
atgggcgaggtcggacgaagcaagagcatccaagtctatggtgatgtggacaaacccgtc
gttgatgcgaagcatgacggagacaaggtcaaagtcagcgtgagcgtcgccaattggcat
ggagcaggctgcacatccatcgacgtgtcgctcaacggccagaccaagccggtggcgtgc
ccgggcggatccacatcgttcgacgtacaggattcgatgtatttcaacacgtattcggct
acagccacggtgcatccgagcaagggttccgccgtcagcgccgagtcgaagccggtggag
atcggcgtgaatcaggagaagcccgatgtgagcgtccatctgaatggctctatctgcgaa
tatgcgtgggcggccaagggcaaggcggatgccatgcaggtgagctacgccgacaagacc
tcgactgccctgagcggcaaggactcgattccggccaagccatggaagctctgcccggcc
atcacggcccactcgtccttcaagaaccatccaggtccggaaagctccgctgcaggcgat
gttgtctatgaggttcctgcgaaggtcggggactggaatcaggtgagcgtcatgtggaac
ccctcggaacgcaacgagatcatcatcgacatgaacggtcaggtggactcctatggcgag
aagacggactacttcgtcacgctgaatggccagcccgctcccatcgttaccaacggaggc
agaatcacggtcaaggcggacgatcatacgccggacgattcgaacgtcaggatcaccatc
aagatcggcagcaaggaaacctctcaggacaagcatgtgaccggcacacgcaaggaggcg
gagaagaaggaggaggacaagccttcggatcagccgaatccatcggagagccccgacgcg
catccaagcgcgttcctgctgcccggcacacactggggcaggatgccgacgttctggctc
gggacaaaccagccgctgccagcatcgcggagcctgctgttccgctga
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