Bifidobacterium choerinum: BcFMB_01250
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Entry
BcFMB_01250 CDS
T05748
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00300
Lysine biosynthesis
bcho00470
D-Amino acid metabolism
bcho01100
Metabolic pathways
bcho01110
Biosynthesis of secondary metabolites
bcho01120
Microbial metabolism in diverse environments
bcho01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BcFMB_01250
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BcFMB_01250
Enzymes [BR:
bcho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BcFMB_01250
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATU19787
UniProt:
A0A2D3D3U5
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All DBs
Position
complement(336695..338284)
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AA seq
529 aa
AA seq
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MAISPIWPQDTARDAAGELTFHGITASALADEYGTPLYIYDLDEVRARARHFVNAAAAAF
SNNTTHVSYAAKAFLSKEMARIVTEEGMYVDTCTLGEMKIALAAGVPGRRLVLHGNNKSD
EEIELAITEGFSKIVIDAPDEPARIAAIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPVGADTTIVDGIDALEDVTPAAANALMEENALKESGETKAQADRRLRYDVRY
PYDLNAADVTEGDRRLAAAMELVANGPAIAVLREIMRHADLELVGIHSHIGSNIHDAEAF
IQAGRRMMLLRKTFYATNGYTLPEVDLGGGYSVAYTDDEDRMDVDQELRRLADAVTKTNR
LLGMPAPIISFEPGRWVVAPAGVTLYTVGAVKTVQLGDGFTNHAGEPIDARSYVAVDGGM
SDNIRPALYGAQYTAVLANRVSDEPARLSRVVGIHCESGDIVVDEVELPADVHRGDLLAV
PVTGAYGRAMASNYNMALFPAVVGVDAYGAHLMMRRETVDDLLSYDVSE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagcccgatctggccgcaggacacggcgcgcgacgccgcaggcgaactgact
ttccacggcatcacggcgagcgcgctcgccgacgaatacggcacaccgctctacatctac
gacctcgacgaggtgcgcgcccgtgcacgccatttcgtcaacgcggctgcggcggcgttc
tccaacaacacaacgcatgtcagctacgcggcgaaggccttcctgagcaaggagatggcg
cgcatcgtcaccgaagagggcatgtacgtggacacctgcacgctcggcgagatgaagatc
gcgctcgcggccggcgtgcccggacgtcggctcgtgctgcacggcaacaacaaaagcgac
gaggagatcgagctggcgatcaccgagggattttcgaagatcgtcatcgatgcgcccgac
gagccggcgcgcatcgccgcgatcgccaagcggctcggcaaacgcgcccgtgtcatgctg
cgcgtgacctccggcatccatgccggcggccatgaatttgtttcgacggcgcatgaggac
cagaagttcggcgtcgcgctgctgcctgtcggcgcggatacgacgatcgtcgacggcatc
gacgcgctcgaggacgtcacgccggcggccgcgaacgcgctgatggaggagaacgcgctc
aaggaatccggcgagacgaaggcgcaggccgatcgccggctgcgctacgatgtgcgctac
ccgtacgacctcaacgcggccgatgtgaccgaaggcgaccgtcgcctcgccgcggcgatg
gagctcgtcgcgaacggcccggccatcgccgtgctgcgcgagatcatgcgccacgccgat
cttgaactcgtcggcatccattcgcatatcggctcgaacatccatgacgccgaggccttc
atccaagccggccgccgtatgatgctgctgcgcaagaccttctatgcgacgaacggatac
acgttgcccgaagtcgatctcggcggcggttattcggtcgcctacaccgatgacgaggac
cgcatggatgtggaccaggagctcaggcgccttgccgacgccgtcacgaagacgaaccgt
ctgctcggcatgcccgcgccgatcatctccttcgaaccgggccgttgggtcgtcgcaccc
gccggtgtcacgttgtatacggtcggcgccgtcaagaccgtccaactgggggacggcttt
acgaaccatgccggcgaaccgatcgacgcacgcagctatgtggccgtcgacggcggcatg
agcgacaacatccgtccggcgctctatggcgcgcagtacacggcggttctcgccaaccgc
gtctcggatgagccggcgcgtctgtcgcgcgtcgtcggcattcactgcgaatccggcgac
atcgtcgtcgacgaggtcgagctgccggccgacgtgcaccgcggcgacctgctcgccgtg
ccggtgaccggagcctatggccgcgcaatggcgagcaactacaacatggcgctcttcccg
gccgtcgtcggcgtcgacgcgtacggcgcgcatctgatgatgcgtcgcgagacggtcgac
gatctgctctcctacgatgtgagcgagtga
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