KEGG   Bifidobacterium choerinum: BcFMB_02465
Entry
BcFMB_02465       CDS       T05748                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
bcho  Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcho03032]
    BcFMB_02465
   03400 DNA repair and recombination proteins [BR:bcho03400]
    BcFMB_02465
Enzymes [BR:bcho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BcFMB_02465
DNA replication proteins [BR:bcho03032]
 Prokaryotic type
  DNA Topoisomerases
   BcFMB_02465
DNA repair and recombination proteins [BR:bcho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BcFMB_02465
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C FUSC
Other DBs
NCBI-ProteinID: ATU19977
UniProt: A0A087AGS6
LinkDB
Position
649512..652253
AA seq 913 aa
MADEPTNNGSDDELSNLSGSMEPLSPQEADNTDYGLMVGTRVQPVDLQEEMRQSYLSYAL
SVIVERALPDVRDGMKPVHRRVVYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAIY
DTLVRMAQSWSMRYLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFV
PNYDGKTQEPTVLPARFPNLLVNGSSGIAVGMATNIPPHNMREVADGVHWALDHPEATRE
ELLDALIARIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIHGRMCLVVTEL
PYQVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKH
SQLQQTFGANMLALVDGVPRTLSLDAFIRHWVDHQLDVIARRTAYLKREAEERDHILQGY
LKALDMIDEVIHLIRSSATVEVARTGLMNLLDVDDVQADAILAMQLRRLAALERQKILDE
HDELMRKIADYADILAKPERQRKIVGDELDEIVAKYGDDRRTKILPFSGEMNVEDLIAEE
NVVVTVTHAGFIKRTKADEYRAQHRGGKGVKGAKLREDDVVDHFFLTSTHNWLLFFTNKG
RVYRCKAYELPEGSRDSKGQHVANLLQFEPDEQIQTVLSIPNYEVAKYLVLATRSGKVKK
TRLSEYDSPRQGGLIAVRLMQSEDGETTDELIGANLCNAEDDIILVSKHGMSLKFRADDE
QLRPMGRQTAGVQGMKFRADDELLAMDVVWGDTDKDLFVVTNEGFAKRTQLSEYRLQGRN
GYGVKAVQLVEGRGFLVGALVVSEEDQIMAIMKSGKVIRSDVSEVKRTGRTTQGVTFAKP
DKDDEIVSIARNAETEDDADGDTVTTDSATGSTSVQPAEGEPVFEARADGDQPTPVIEED
SAAIERTDEDDAE
NT seq 2742 nt   +upstreamnt  +downstreamnt
gtggcagacgaacccaccaacaacggctcggacgacgagctcagcaatctctccggctcg
atggagccgctcagtccgcaggaagcggacaacaccgattacggcctgatggtcggcacg
cgcgtgcagccggtcgacctgcaggaggagatgcgccagtcgtacctctcctacgcgctc
tccgtcatcgtggagcgcgcgctgcccgacgtgcgcgacggcatgaagccggtgcatcgc
cgcgtcgtctacgcgatgtacgacggcggctaccgccccgaccgcggctacaacaagtgc
tcgcgcgtcgtcggcgacgtcatgggcaagtaccatccgcacggcgattcggcgatctac
gacacgctcgtgcgcatggcgcagtcgtggtcgatgcgctatctgctcgtcgacggtcag
ggcaacttcggctcccccggcgacgacccggccgccgcgatgcgttacaccgaatgccgc
atggcgccgctcgcgatggagatggtgcgcgacatcgacaaggacaccgtcgacttcgtg
ccgaactacgacggcaagacgcaggagccgaccgtgctgccggcacgcttcccgaacctg
ctcgtcaacggctcctccggcatcgccgtcggcatggcgacgaacatccccccgcataac
atgcgcgaggtcgccgacggcgtccactgggcgctcgaccatcccgaggcgacgcgcgag
gagctgctcgacgcgctcatcgcccgcatcaagggaccggacttcccgaccggcgcgacg
atcctcggccacaagggcatcgaacaggcctaccgcaccggccgcggtctgatcacgatg
cgcgccgtcgtcaacaccgaggagatccacggccgcatgtgcctcgtcgtcaccgagctg
ccgtaccaggtcaacccggaccgtctcgtcgtctcgatccgcgaggccgtgcgcgacggc
aagatccagggcatcgccgacatgcgcgacgagacctcgggacgcaccggccagcgtctc
gtgctcgtgctcaagcgcgacgccgtcccgaaggtcgtgctcaacaacctgtacaagcat
tcgcagctgcagcagaccttcggcgcgaacatgctcgcgctcgtcgacggcgtgccgcgc
acgctgagcctcgacgcgttcatccgccactgggtcgaccaccagctcgacgtcatcgcg
cgccgcaccgcctacctcaagcgcgaggccgaggaacgcgaccacatcctgcagggctat
ctcaaggccctcgacatgatcgacgaggtaatccatctgatccgttcgtcggcgaccgtc
gaggtcgcgcgcaccggcctgatgaacctgctcgacgtcgacgacgtgcaggccgatgcg
atcctcgcgatgcagctgcgccgcctcgccgcgctcgaacgccagaagatcctcgacgag
cacgacgagctgatgcgcaagatcgccgactacgccgacatcctcgcgaagccggaacgc
cagcgcaagatcgtcggcgacgagctcgacgagatcgtcgcgaagtacggcgacgaccgc
cgcacgaagatcctgccgttctccggcgagatgaacgtcgaggacctcatcgccgaggag
aacgtcgtcgtcaccgtgacgcacgccggcttcatcaagcgcacgaaggccgacgagtac
cgcgcccagcaccgcggcggcaagggcgtcaagggcgccaagctgcgcgaggacgacgtc
gtcgaccacttcttcctgacgagcacgcacaactggctgctgttcttcacgaacaagggg
cgcgtctaccgttgcaaggcctatgagctgccggaggggtcgcgcgactccaagggccag
cacgtcgcgaacctgctgcagttcgaacccgacgagcagatccagaccgtgctgtcgatc
ccgaactatgaggtcgcgaagtacctcgtgctcgcgacgcgctccggcaaggtcaagaag
acgcgcctgtccgaatacgattcgccgcgtcagggcggcctcatcgccgtgcgcctgatg
cagagcgaggatggcgagacgaccgacgagctgatcggcgcgaacctgtgcaacgccgag
gacgacatcatcctcgtctcgaagcacggcatgagcctcaagttccgcgccgacgacgag
cagctgcgcccgatgggccgccagaccgccggcgtgcagggcatgaagttccgcgccgat
gacgagctgctcgcgatggacgtcgtctggggcgacaccgacaaggacctcttcgtcgtc
acgaacgaaggcttcgcgaagcgcacgcagctgagcgaataccgtctccagggccgcaac
ggctacggcgtcaaggccgtgcagctcgtcgagggccgcggtttcctcgtcggcgcgctc
gtcgtgtccgaggaggaccagatcatggcgatcatgaagtccggcaaggtcatccgttcg
gacgtcagcgaggtcaagcgcaccggccgcacgacgcagggcgtcaccttcgcgaagccc
gacaaggacgacgagatcgtctcgatcgcgcgcaacgccgagaccgaggacgacgccgac
ggcgacaccgtcacgaccgattccgcgaccggcagcacgagcgtgcagccggcggaaggc
gaaccggtcttcgaggcccgcgccgacggcgaccagccgacgccggtcatcgaggaggat
tcggcggcgatcgaacgcaccgacgaggacgacgccgaatga

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