Bifidobacterium choerinum: BcFMB_03540
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Entry
BcFMB_03540 CDS
T05748
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00290
Valine, leucine and isoleucine biosynthesis
bcho00660
C5-Branched dibasic acid metabolism
bcho01100
Metabolic pathways
bcho01110
Biosynthesis of secondary metabolites
bcho01210
2-Oxocarboxylic acid metabolism
bcho01230
Biosynthesis of amino acids
Module
bcho_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
BcFMB_03540
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
BcFMB_03540
Enzymes [BR:
bcho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
BcFMB_03540
4.2.1.35 (R)-2-methylmalate dehydratase
BcFMB_03540
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
ATU20152
UniProt:
A0A2D3D416
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All DBs
Position
927656..929059
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AA seq
467 aa
AA seq
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MGMTLAEKVWADHLVRKGDDGAPDLLYIDLMLMHEVTSPQAFEGLRLAGRTPRHVDQLIA
TEDHNTPTVDIDRPNPDETSATQLTTLEKNCKEFGVRLHPLGDADQGIVHAFAPMLGLTQ
PGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHVMATQTLSLKPFKTMAINIDGDLPADVS
AKDIILAIIAKIGTGGGQGYVLEYRGKAIENLSMDARMTICNMSIEAGARAGMIAPDETT
FAYLKDRPHAPKGELWDQAVEYWKTLKTDDDAQFDAEVTLRAEDLEPFVTWGTNPGQGVP
ISGSVPAPEDFADATERAAAERALDYMGLEAGTPIRDIPVDTVFIGSCTNGRIEDLRIAA
EIMKGHKKADSIHRVLVVPASSRIRLQAEEEGLDQIFKDFGAEWRNAGCSMCLGMNPDKL
VVGERSISTSNRNFEGRQGKGSRTHLASPAVAAATAIRGTISTPADL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgacactggccgaaaaggtctgggctgatcatttggtacgcaagggcgacgac
ggcgcccccgacctgctgtacatcgacctgatgctcatgcacgaggtgacgagcccgcag
gccttcgaggggctgcgcctcgccggccgcaccccgcgccacgtcgaccagctcatcgcg
actgaggaccacaacacgcccaccgtcgacatcgaccggccgaacccggacgagacgagc
gcgacgcagctgacgacgctcgagaagaactgcaaggagttcggcgtacgtctgcacccg
ctcggcgacgccgaccagggcatcgtccacgcgttcgcgccgatgctcggcctgacgcag
ccgggcatgacgatcgtgtgcggcgactcgcacacctcgacgcacggcgcgttcggcgcg
ctcgccttcggcatcggcacctccgaggtcgagcatgtgatggcgacgcagacactcagc
ctcaagccgttcaagacgatggcgatcaacatcgacggcgatctgccggcggacgtcagc
gcgaaggacatcatcctcgcgatcatcgcgaagatcggcaccggcggcggccagggttac
gtgctcgaataccgcggcaaggccatcgagaacctgtcgatggacgcgcgcatgacgatc
tgcaacatgagcatcgaggcgggcgcgcgtgccggcatgatcgcccccgacgagacgacc
ttcgcgtatctcaaggaccgtccgcatgcgccgaagggcgagctgtgggaccaggcggtc
gagtactggaagacgctgaagaccgacgacgacgcgcagttcgacgccgaggtcacgctg
cgcgccgaggacctcgagcccttcgtcacctggggcacgaaccccggccagggcgtgccg
atctccggcagcgtcccggcgcccgaggacttcgccgacgcgaccgaacgcgccgccgcc
gagcgcgcgctcgactacatgggcctcgaggcgggcacgccgatccgcgacatcccggtg
gacacggtgttcatcggctcgtgcacgaacggccgcatcgaggacctgcgcatcgccgcc
gagatcatgaagggccacaagaaggccgattcgatccaccgcgtgctcgtcgtgccggcg
tcctcgcgcatccgcctgcaggcggaggaggagggcctcgaccagatcttcaaggacttc
ggcgccgaatggcgcaacgccggctgctcgatgtgcctcggcatgaacccggacaagctc
gtcgtcggcgaacgttcgatctccacgtccaaccgcaacttcgagggccgtcagggcaag
ggctcgcgcacgcatctcgcgtcgccggccgtggccgccgcgacggcgatccgcggcacg
atctcgacgcccgccgacctgtaa
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