Bifidobacterium choerinum: BcFMB_03715
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Entry
BcFMB_03715 CDS
T05748
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BcFMB_03715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcho03019
]
BcFMB_03715
03009 Ribosome biogenesis [BR:
bcho03009
]
BcFMB_03715
03036 Chromosome and associated proteins [BR:
bcho03036
]
BcFMB_03715
Enzymes [BR:
bcho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BcFMB_03715
Messenger RNA biogenesis [BR:
bcho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BcFMB_03715
Ribosome biogenesis [BR:
bcho03009
]
Eukaryotic type
90S particles
RNase
BcFMB_03715
Prokaryotic type
rRNA processing factors
BcFMB_03715
Chromosome and associated proteins [BR:
bcho03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BcFMB_03715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Ribosomal_S5
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ATU21175
UniProt:
A0A2D3D7U7
LinkDB
All DBs
Position
complement(980535..981293)
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AA seq
252 aa
AA seq
DB search
MTNHVTVTIDDTNPAHPLLEALGTTLQPDLLVEALTHRSFSHEHPDAKNYERLEFLGDAV
LELVVTETLFTAHPDMTEGQLAKIRAKAVSEDALSAIARTKLNASPYILLGHGELEQGGA
EKSSILCDIVESLIGATFVEYGIDGAREVVHRLVDGTLAEVASEGPALDWKTSLTVKAHQ
LGLGEPRYQMSVGGPEYAQQFTARAMLGDSDDVVGIGHGTSKRKAQLAAAEQAWKNLDAA
QTAVDDDAANGD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccatgtgaccgtaaccatcgacgacaccaatcccgcgcatccgctactggag
gcgctcggcacgacgctgcagccggatctgctcgtcgaggcactcacccaccgttccttc
tcccatgagcatccggacgcgaagaactacgaacgtctcgagttcctcggcgacgccgtt
ctcgaactcgtcgtcaccgaaacgctgttcaccgcgcatccggacatgaccgaaggccag
ctcgcgaagatccgcgcgaaggccgtctccgaggacgcgctgtccgcgatcgcccgcacg
aagctcaacgcgagcccgtacatcctgctcggccacggcgagctcgagcagggcggcgcc
gagaaaagctcgatcctgtgcgacatcgtcgaatcgctgatcggcgcgaccttcgtcgaa
tacggcatcgacggcgcgcgcgaggtcgtccaccgtctcgtcgacggcacgctcgccgaa
gtcgcgagcgagggacccgcgctcgactggaagacgtcgctcaccgtgaaggcgcatcag
ctgggcttgggcgagccgcgctaccagatgtcggtcggcggccccgaatacgcgcagcag
ttcacggcgcgcgcgatgctcggcgacagcgacgacgtcgtcggcatcggccacggcacg
agcaagcgcaaggcgcagctcgccgccgccgaacaggcatggaagaacctcgacgccgcg
cagacggccgtcgacgacgacgcggcgaacggcgactga
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