KEGG   Bifidobacterium choerinum: BcFMB_03715
Entry
BcFMB_03715       CDS       T05748                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bcho  Bifidobacterium choerinum
Pathway
bcho03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BcFMB_03715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcho03019]
    BcFMB_03715
   03009 Ribosome biogenesis [BR:bcho03009]
    BcFMB_03715
   03036 Chromosome and associated proteins [BR:bcho03036]
    BcFMB_03715
Enzymes [BR:bcho01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BcFMB_03715
Messenger RNA biogenesis [BR:bcho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BcFMB_03715
Ribosome biogenesis [BR:bcho03009]
 Eukaryotic type
  90S particles
   RNase
    BcFMB_03715
 Prokaryotic type
  rRNA processing factors
   BcFMB_03715
Chromosome and associated proteins [BR:bcho03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BcFMB_03715
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm Ribosomal_S5 DSRM_2 RM44_endonuclase
Other DBs
NCBI-ProteinID: ATU21175
UniProt: A0A2D3D7U7
LinkDB
Position
complement(980535..981293)
AA seq 252 aa
MTNHVTVTIDDTNPAHPLLEALGTTLQPDLLVEALTHRSFSHEHPDAKNYERLEFLGDAV
LELVVTETLFTAHPDMTEGQLAKIRAKAVSEDALSAIARTKLNASPYILLGHGELEQGGA
EKSSILCDIVESLIGATFVEYGIDGAREVVHRLVDGTLAEVASEGPALDWKTSLTVKAHQ
LGLGEPRYQMSVGGPEYAQQFTARAMLGDSDDVVGIGHGTSKRKAQLAAAEQAWKNLDAA
QTAVDDDAANGD
NT seq 759 nt   +upstreamnt  +downstreamnt
atgaccaaccatgtgaccgtaaccatcgacgacaccaatcccgcgcatccgctactggag
gcgctcggcacgacgctgcagccggatctgctcgtcgaggcactcacccaccgttccttc
tcccatgagcatccggacgcgaagaactacgaacgtctcgagttcctcggcgacgccgtt
ctcgaactcgtcgtcaccgaaacgctgttcaccgcgcatccggacatgaccgaaggccag
ctcgcgaagatccgcgcgaaggccgtctccgaggacgcgctgtccgcgatcgcccgcacg
aagctcaacgcgagcccgtacatcctgctcggccacggcgagctcgagcagggcggcgcc
gagaaaagctcgatcctgtgcgacatcgtcgaatcgctgatcggcgcgaccttcgtcgaa
tacggcatcgacggcgcgcgcgaggtcgtccaccgtctcgtcgacggcacgctcgccgaa
gtcgcgagcgagggacccgcgctcgactggaagacgtcgctcaccgtgaaggcgcatcag
ctgggcttgggcgagccgcgctaccagatgtcggtcggcggccccgaatacgcgcagcag
ttcacggcgcgcgcgatgctcggcgacagcgacgacgtcgtcggcatcggccacggcacg
agcaagcgcaaggcgcagctcgccgccgccgaacaggcatggaagaacctcgacgccgcg
cagacggccgtcgacgacgacgcggcgaacggcgactga

DBGET integrated database retrieval system