KEGG   Bifidobacterium choerinum: BcFMB_04555
Entry
BcFMB_04555       CDS       T05748                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
bcho  Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcho03400]
    BcFMB_04555
DNA repair and recombination proteins [BR:bcho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BcFMB_04555
SSDB
Motif
Pfam: AAA_25 Zn_ribbon_LapB ATPase DnaB_C Lon_C DUF7125 ChlI ABC_tran AAA_16 Rad51 SLFN-g3_helicase AAA_22 NACHT nSTAND_NTPase5 AAA_24 AAA nSTAND3 AAA_14 GvpD_P-loop EAD2 Bac_DnaA NTPase_1 AAA_29 DUF7159
Other DBs
NCBI-ProteinID: ATU20317
UniProt: A0A2D3D5B4
LinkDB
Position
complement(1175414..1176826)
AA seq 470 aa
MAKSNVSYVCTECGWTGAKWFGRCPECGQWGTIEEFHETRPAASTSRTAAPGRTSRTTPT
AVALSAAQPITDVDTASVTRVPTGFGEFDRVLGGGIVPGSVVLIAGEPGIGKSTLLLETA
GNIARNTPSGNVLYISGEESQAQVRLRASRINAVKPNLLLASTTDLATALGLIEQHRPAL
AIVDSAQTIVSQDVDGISGGSTQVREVASALIDTAKSLDVPVLLVGHVTKDGSIAGPRTL
EHLVDVVCQFEGEPQTALRLLRAVKNRFGPTDEVGCFDMSGVGIEEVADPAGLFLSSNET
PVDGTCVTFTLDGHRSLPVEVQALVTNSVLPTPRRAVNGVDSNRIAMLVAVLYRHGGLSL
LSNDLYISTIAGGVAKEPSCDLAIVAALASAATSTPIARSTCAVGEISLTGQVRPVPRLE
HRLREAARLGFTTALVPPMRTSVSIPGLRIVEVRSLRDALDALKLTKRGK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcgaaaagcaatgtgagttacgtatgcaccgagtgtggatggaccggcgcgaaatgg
ttcggccgctgccccgaatgcggccagtggggcacgatcgaggagttccacgagacgcgt
cccgccgcgtccacgtcgcgcacggccgcacccggccgcacgtcgcgcacgacgccgacg
gcggtcgcattaagcgccgcccagccgatcaccgacgtcgacacggcgtccgtcacccgc
gtgcccaccggcttcggcgaattcgaccgcgtgctcggcggcggcatcgtccccggctcg
gtcgtgctcatcgccggcgaacccggcatcggcaaatccacgctgctgctggagacagcc
ggcaacatcgcacgcaacacgccgtccggcaacgtcctgtacatctccggcgaggagtcg
caggcgcaggtgcggctgcgcgcgtcgcgcatcaacgccgtcaagccgaacctgctgctc
gcctcgacgaccgacctcgcgaccgcgctcggactcatcgaacagcacaggccggcgctc
gcgatcgtcgactcggcgcagacgatcgtctcccaagacgtcgacggcatctccggcggc
tccacgcaggtgcgcgaggtcgcgagcgcgctcatcgacacggcgaagtcgctcgacgtg
ccggtgctgctcgtcggccatgtcacgaaggacggctcgatcgccggcccgcgcacgctt
gagcatctcgtcgacgtcgtctgccagttcgagggcgagccgcagacggcgttgcggctg
ctgcgcgccgtgaagaaccgtttcggcccgacagacgaggtcggctgcttcgacatgagc
ggcgtcggcatcgaggaggtcgccgacccggccggcctgttcctgtcgtcgaacgagacg
cccgtcgacggcacctgcgtcacgttcacgctcgacggccaccgttcgctgccggtggag
gtgcaggcgctcgtcacgaactcggtgctgccgacaccccggcgcgccgtcaacggcgtc
gactcgaaccgcatcgcgatgctcgtcgccgtcctctaccggcacggcggcctgtcgttg
ctgagcaacgatctgtacatctcgacgatcgccggcggcgtcgcgaaggagccgagctgc
gacctagcgatcgtcgcggcgctcgcgagcgcggcgacgtccacgccgatcgcgcgctcg
acctgcgcggtcggcgagatctcgttgaccggccaggtgcgtccggtgcctcgtctcgaa
caccggctgcgcgaggcggcgcgcctggggttcacgacggcgctcgtgccgccgatgcgc
acttcggtgtcgattccggggctgcgcatcgtcgaggtgcgctcgctgcgcgacgcgctc
gacgcgctcaaactgacgaagcgcggcaaatga

DBGET integrated database retrieval system