Bifidobacterium choerinum: BcFMB_04555
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Entry
BcFMB_04555 CDS
T05748
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcho03400
]
BcFMB_04555
DNA repair and recombination proteins [BR:
bcho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BcFMB_04555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
Lon_C
DUF7125
ChlI
ABC_tran
AAA_16
Rad51
SLFN-g3_helicase
AAA_22
NACHT
nSTAND_NTPase5
AAA_24
AAA
nSTAND3
AAA_14
GvpD_P-loop
EAD2
Bac_DnaA
NTPase_1
AAA_29
DUF7159
Motif
Other DBs
NCBI-ProteinID:
ATU20317
UniProt:
A0A2D3D5B4
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Position
complement(1175414..1176826)
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AA seq
470 aa
AA seq
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MAKSNVSYVCTECGWTGAKWFGRCPECGQWGTIEEFHETRPAASTSRTAAPGRTSRTTPT
AVALSAAQPITDVDTASVTRVPTGFGEFDRVLGGGIVPGSVVLIAGEPGIGKSTLLLETA
GNIARNTPSGNVLYISGEESQAQVRLRASRINAVKPNLLLASTTDLATALGLIEQHRPAL
AIVDSAQTIVSQDVDGISGGSTQVREVASALIDTAKSLDVPVLLVGHVTKDGSIAGPRTL
EHLVDVVCQFEGEPQTALRLLRAVKNRFGPTDEVGCFDMSGVGIEEVADPAGLFLSSNET
PVDGTCVTFTLDGHRSLPVEVQALVTNSVLPTPRRAVNGVDSNRIAMLVAVLYRHGGLSL
LSNDLYISTIAGGVAKEPSCDLAIVAALASAATSTPIARSTCAVGEISLTGQVRPVPRLE
HRLREAARLGFTTALVPPMRTSVSIPGLRIVEVRSLRDALDALKLTKRGK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcaatgtgagttacgtatgcaccgagtgtggatggaccggcgcgaaatgg
ttcggccgctgccccgaatgcggccagtggggcacgatcgaggagttccacgagacgcgt
cccgccgcgtccacgtcgcgcacggccgcacccggccgcacgtcgcgcacgacgccgacg
gcggtcgcattaagcgccgcccagccgatcaccgacgtcgacacggcgtccgtcacccgc
gtgcccaccggcttcggcgaattcgaccgcgtgctcggcggcggcatcgtccccggctcg
gtcgtgctcatcgccggcgaacccggcatcggcaaatccacgctgctgctggagacagcc
ggcaacatcgcacgcaacacgccgtccggcaacgtcctgtacatctccggcgaggagtcg
caggcgcaggtgcggctgcgcgcgtcgcgcatcaacgccgtcaagccgaacctgctgctc
gcctcgacgaccgacctcgcgaccgcgctcggactcatcgaacagcacaggccggcgctc
gcgatcgtcgactcggcgcagacgatcgtctcccaagacgtcgacggcatctccggcggc
tccacgcaggtgcgcgaggtcgcgagcgcgctcatcgacacggcgaagtcgctcgacgtg
ccggtgctgctcgtcggccatgtcacgaaggacggctcgatcgccggcccgcgcacgctt
gagcatctcgtcgacgtcgtctgccagttcgagggcgagccgcagacggcgttgcggctg
ctgcgcgccgtgaagaaccgtttcggcccgacagacgaggtcggctgcttcgacatgagc
ggcgtcggcatcgaggaggtcgccgacccggccggcctgttcctgtcgtcgaacgagacg
cccgtcgacggcacctgcgtcacgttcacgctcgacggccaccgttcgctgccggtggag
gtgcaggcgctcgtcacgaactcggtgctgccgacaccccggcgcgccgtcaacggcgtc
gactcgaaccgcatcgcgatgctcgtcgccgtcctctaccggcacggcggcctgtcgttg
ctgagcaacgatctgtacatctcgacgatcgccggcggcgtcgcgaaggagccgagctgc
gacctagcgatcgtcgcggcgctcgcgagcgcggcgacgtccacgccgatcgcgcgctcg
acctgcgcggtcggcgagatctcgttgaccggccaggtgcgtccggtgcctcgtctcgaa
caccggctgcgcgaggcggcgcgcctggggttcacgacggcgctcgtgccgccgatgcgc
acttcggtgtcgattccggggctgcgcatcgtcgaggtgcgctcgctgcgcgacgcgctc
gacgcgctcaaactgacgaagcgcggcaaatga
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