Bifidobacterium choerinum: BcFMB_04585
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Entry
BcFMB_04585 CDS
T05748
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BcFMB_04585
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcho01007
]
BcFMB_04585
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcho03016
]
BcFMB_04585
Enzymes [BR:
bcho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
BcFMB_04585
Amino acid related enzymes [BR:
bcho01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BcFMB_04585
Transfer RNA biogenesis [BR:
bcho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BcFMB_04585
Prokaryotic type
BcFMB_04585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
LOH1CR12
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
ATU20322
UniProt:
A0A087ABY1
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All DBs
Position
1183429..1184712
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AA seq
427 aa
AA seq
DB search
MLDIQFIREHPEVVKESQRKRGESVELVDEVLRSDEVRRTSLKKYEEARAKQKEIGKQVA
KAAADEKAALIAQTKELSEQVSAYKADADTANEQYTTAMWQLSNIVEPEAPEGGEDDYVV
VKKVGQIRDFAAEGFEPKDHLTLGEGVAGIDMKRGVKVSGSRFYFLRGDIARMQIAMLTM
AVDQAHEHDFVLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEDYLVGTSEVALAGMH
EDEILDLSHGPLRYCGWSSCYRREAGAAGKDTTGIIRVHQFDKVEMFVYCKPEDSYEQHK
HLLAMEEEMLGKVEVPYRVIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTQYQ
ARRLNIRERVENGTEPVATLNGTLATTRWLVAIMENHQQKDGSIVVPKAMRPYMGGKEVI
EPTTWEA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatattcaattcatccgtgaacaccctgaagtcgtcaaggaatcccagcgcaag
cgcggcgagtcggtcgaactcgtcgacgaggtcctcagaagcgacgaggtgcgccgcacc
tcgctcaagaagtacgaggaggcgcgcgccaagcagaaggagatcggcaagcaggtcgcg
aaggcggccgccgacgagaaggccgcgctgatcgcgcagacgaaggagctctccgagcag
gtctccgcgtacaaggcggacgcggacacggcgaacgaacagtacaccacggcgatgtgg
cagctgtcgaacatcgtcgagccggaggctccggaaggcggcgaggacgactacgtcgtc
gtcaagaaggtcggccagatccgcgacttcgcagccgagggcttcgaaccgaaggaccac
ctcacgctcggcgagggcgtcgccggcatcgacatgaagcgcggcgtcaaggtctctgga
tcgcgcttctacttcctgcgcggcgacatcgcgcgcatgcagatcgcgatgctgacgatg
gccgtcgaccaggcgcacgaacacgacttcgtgctcgcgatcacgccgacgctcgtgcgt
cccgaggtgatgcgcggcaccggtttcctcaactcgcacgccgatgagatctaccgtctg
cgcgagcccgacgaggactacctcgtcggcacgtccgaggtcgcgctcgcgggcatgcac
gaggacgagatcctcgacctgagccacggcccgctgcgctactgcggctggagctcgtgc
taccgccgcgaggcgggcgccgccggcaaggacacgaccggcattatccgcgtccaccag
ttcgacaaggtcgagatgttcgtctactgcaagcccgaggactcctacgagcagcacaag
cacctgctcgcgatggaggaggagatgctcggcaaggtcgaggtgccgtaccgcgtcatc
gacacggccgccggcgacctcggctcgtcggccgcgcgcaagttcgactgcgaggcgtgg
gtgccgacgcagggccgctaccgtgagctcacatcgacgtcgaactgcacgcagtaccag
gcgcgccgcctcaacatccgagagcgcgtcgagaacggcaccgagccggtcgccacgctc
aacggcacgctcgcgacgacgcgctggctcgtcgcgatcatggagaaccaccagcagaag
gacggctcgatcgtcgtgccgaaggcgatgcgtccctacatgggcggcaaggaggtcatc
gagccgacgacgtgggaggcgtga
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