Bifidobacterium choerinum: BcFMB_05030
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Entry
BcFMB_05030 CDS
T05748
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BcFMB_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcho03019
]
BcFMB_05030
03009 Ribosome biogenesis [BR:
bcho03009
]
BcFMB_05030
Messenger RNA biogenesis [BR:
bcho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BcFMB_05030
Ribosome biogenesis [BR:
bcho03009
]
Eukaryotic type
Pre-60S particles
RNases
BcFMB_05030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATU20385
UniProt:
A0A087AIA3
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All DBs
Position
1286588..1287235
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AA seq
215 aa
AA seq
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MVEAHDDEVYSATNSRLIWIDCEMTGLDIFHDELCEISVVPTDFELNVLDDGIDLVIRPS
DAAVAHMNDFVRAMHTRSGLITEWEQGLSVEEAERKVIDYVTRFIPEGVKPLLAGNSVGS
DKKFLDRYMPDLMSRLHYRVIDVSTIKELARRWYPAVYENRPAKNGGHRALADIIESLDE
LRYYRAAVMAPEPGPDAAEAKRIAGDIERTSIARQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcacatgacgacgaggtgtactcggcgacgaattcacgactcatctggatc
gactgcgagatgacggggctcgacatcttccacgacgagctgtgcgagatctccgtcgtg
cccaccgacttcgaactcaacgtgctcgacgacggcatcgacctcgtcatccgtccctcc
gacgcggccgtcgcgcatatgaacgacttcgtgcgtgcaatgcacacccgttccggcctc
atcaccgaatgggagcagggcctgagcgtcgaggaggccgagcggaaggtcatcgactac
gtcacgcgcttcatccccgaaggcgtcaagccgctgctcgccggcaactcggtcggctcc
gacaagaagttcctcgaccgctacatgccggacctgatgagccggctgcactaccgcgtc
atcgacgtgagcacgatcaaggagctcgcgcgccgctggtatccggccgtctacgagaac
cgtccggcgaaaaacggcggccaccgcgcgctcgccgacatcatcgaatcgctcgacgag
ctgcgctactaccgcgcggccgtcatggcgccggagcccggccccgacgcggccgaggcg
aagcggatcgccggcgacatcgagcgcacgagcatcgcgcggcagtga
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