Bifidobacterium choerinum: BcFMB_05050
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Entry
BcFMB_05050 CDS
T05748
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BcFMB_05050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcho01007
]
BcFMB_05050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcho03016
]
BcFMB_05050
Enzymes [BR:
bcho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
BcFMB_05050
Amino acid related enzymes [BR:
bcho01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BcFMB_05050
Transfer RNA biogenesis [BR:
bcho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BcFMB_05050
Prokaryotic type
BcFMB_05050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
DUF1198
Motif
Other DBs
NCBI-ProteinID:
ATU20389
UniProt:
A0A2D3D5G6
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Position
1290373..1292157
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AA seq
594 aa
AA seq
DB search
MSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEGVIREEIN
GIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMY
SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRKAYMDERGAYE
RIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALHTPQVEA
IDFSATPAAEKRATPDAKTIDEMVAFANETYPRADGRAWQASDILKNVVVAVRHAEDDEH
DEPWRELIVVGIPGDRKIDMKRLEAQFAPAELEEATEEDLKAHPELVQGFIGPMIAGPQN
DADDALRYFIDAHVAEGSAWFTGADEQDVDYYDLVYGRDFKADGVVEAVEVRDGDMSPDG
SGPLSFERGVEIGQVFQLGLKYSEALGLKVLDQNGKTVPVWMGCYGIGVSRVLACIAETH
HDERGLAWPSNIAPAQVHVVATGKDQKAFEAAERLIEQLEADGVEVIYDDRKKVSPGVKF
KDAELIGVPIIAVAGRDTVNDGTIEIRDRDGGNKEAVPAESAAQVIADRLRRML
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatgttcctgcgtacgctgcgcgaagaccccgccgacgcagacgtcgattcc
gcgaagctgctccagcgcgccggctacatccgcaaggccgctccgggcatctggacctgg
ctgccgctgggcctcgccgtcctcaacaagatcgagggcgtcatccgcgaggagatcaac
ggcatcggcgcccaggaggtgcacttcccggcgctgctgccgcgcgaaccgtacgaggcg
acgcaccgctgggaggagtacggcgacaacatcttccgtctcaaggatcgccacgaggcc
gactatctgctcgcgccgacgcatgaggagatgttcacgctgctcgtcaaggacatgtat
tcgtcctacaaggacctgccggtgacgctctaccagatccagacgaagtaccgcgacgag
ttccgtccgcgcgccggcctgatccgcggccgcgagttcatcatgaaggacgcctactcg
ttcaccgtcgacgaggagggcatgcgcaaggcctacatggacgagcgcggcgcctacgag
cgcatcttccagcgtctcgatttgaagtacgtcccggtgttcgcgatgagcggcccgatg
ggcggctcggcgtccgaggagttcctcgcgccgatgccgatcggcgaggacaccttcgcg
ctcgcgccgagcggcaaggcatggaacgtcgaggcgctgcacacgcctcaggtcgaggcg
attgacttctcggcgacgccggccgccgagaagcgcgcgacgccggacgcgaagacgatc
gacgagatggtcgcgttcgcgaacgagacctatccgcgtgccgacggccgcgcatggcag
gcttcggacatactcaagaacgtcgtcgtcgccgtcaggcacgccgaggacgacgagcac
gacgaaccgtggcgcgaactgatcgtcgtcggcatccccggcgaccgcaagatcgacatg
aagcgcctcgaggcgcagttcgccccggccgagctcgaggaggcgaccgaggaggacctc
aaggcgcatccggaacttgtgcagggcttcatcggcccgatgatcgccggtccgcagaac
gacgccgacgatgcgctgcgctacttcatcgacgcgcatgtggccgaaggctcggcatgg
ttcaccggcgccgacgagcaggacgtcgactactacgacctcgtctacggccgcgacttc
aaggccgacggcgtcgtcgaggccgtcgaggtccgcgacggcgatatgagcccggacggc
tccggcccgctgagcttcgaacgcggcgtcgagatcggccaggtcttccagctcggcctg
aagtattcggaggcgctcggcctcaaggtgctcgaccagaacggcaagacggtgccggtg
tggatgggctgctacggcatcggcgtgagccgtgtgctcgcctgcatcgccgagacgcat
cacgacgagcgcggcctggcatggccgtcgaacatcgccccggcgcaggtgcacgtcgtg
gcgaccggcaaggaccagaaggccttcgaagcggccgagcgcctcatcgagcaactcgag
gccgacggcgtcgaggtcatctacgacgaccgtaaaaaggtctcgccgggcgtcaagttc
aaggacgctgaactcatcggcgtgccgatcatcgcagtcgccggacgcgacaccgtcaac
gacggcacgatcgagatacgcgaccgcgacggcggcaacaaggaggccgtgccggccgaa
tcggccgcacaggtcatcgccgaccgtctgcgccggatgctctga
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