Bifidobacterium choerinum: BcFMB_05080
Help
Entry
BcFMB_05080 CDS
T05748
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcho03009
]
BcFMB_05080
Enzymes [BR:
bcho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
BcFMB_05080
Ribosome biogenesis [BR:
bcho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BcFMB_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
ATU20395
UniProt:
A0A087AI93
LinkDB
All DBs
Position
complement(1298812..1299291)
Genome browser
AA seq
159 aa
AA seq
DB search
MNIDIVCVGKVKERYLRDAIDEYRKRLSRFAKVDVIEVGDEKTPEHASDTLNEQIKAKEG
ERILRHLRDNAFVVALAIEGRQLTSERLAAQIAQWGLHGVSHLQFVIGGSLGLDPRVLRR
ADMLLSFSKMTFPHQLMRVILLEQVYRAFKINAHEPYHK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgacatcgtctgcgtcggcaaggtcaaggaacgctatctgcgcgacgcgatc
gacgaataccgcaaacgcctgtcgcgcttcgcgaaggtcgacgtcatcgaggtcggcgac
gagaagacgccggagcacgcctccgacacgctcaacgagcagatcaaggcgaaggagggc
gagcgcatcctccggcatctgcgcgacaacgccttcgtcgtcgcgctcgcgatcgagggc
aggcagctgacgagcgagcggctcgccgcgcagatcgcgcagtgggggctgcacggcgtc
agccatctgcagttcgtcatcggcggctcgctcggcctcgacccgcgggtcctcagacgt
gcggacatgctgctgagcttctcgaagatgacgttcccgcaccagctgatgcgcgtcatc
ctgctcgagcaggtctaccgggccttcaagatcaacgcgcacgagccgtaccacaaatga
DBGET
integrated database retrieval system
