Bifidobacterium choerinum: BcFMB_05530
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Entry
BcFMB_05530 CDS
T05748
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00220
Arginine biosynthesis
bcho00240
Pyrimidine metabolism
bcho00250
Alanine, aspartate and glutamate metabolism
bcho01100
Metabolic pathways
bcho01110
Biosynthesis of secondary metabolites
bcho01240
Biosynthesis of cofactors
Module
bcho_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BcFMB_05530
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BcFMB_05530
00220 Arginine biosynthesis
BcFMB_05530
Enzymes [BR:
bcho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BcFMB_05530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
GARS_A
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
ATU20469
UniProt:
A0A2D3D5P7
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All DBs
Position
1403366..1406758
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AA seq
1130 aa
AA seq
DB search
MPKRNDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILERIIAKERPDALLPTLGGQTALNAAVALGEAGVLKKYNVELIGASL
EAIDRGEDRESFKKVVEEAGAESARSDIAHTLEEVDAIAERFGFPLVVRPSFTMGGLGSG
IAHDTEELHRIAGAGIHYSPTDEVLIEEGIEGWKEYELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPVFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAIHPKTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITKSTPASFEPTIDYVVTKVPR
FAFEKFPGADPTLTTSMKSVGEAMALAGNFEESLGKAMRSIDKRDMAFSWDGDKPSADGV
AELLEAMRTPTEHRYLQLMRAIWGGATEEQIFEATKIDPWFIRQFTRINDMAMQVRAAET
LSPRLLKKAKLAGLSDLQIAHLRGLGDAGENTIRELRWNYGLHPVYKTVDTCAAEFDAAT
PYYYSCYADETELRRRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPIKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLRAEKLNAPRFGTALSLGEALDAAHNIGYPVLVRPSY
VLGGRGMEIVYDDAQLEKYVNRALDQAQADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GHELYIGGIMEHIEEAGVHSGDAACTLPPSTLSDDQIRRLREATLAIAKGCGVQGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMVGETIQQQRDNGLLLPHGDG
GDARIGQQVAVKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLS
AYEGGLPTSGTVFLSVNDTDKRQLPLFAVRLVELGFTICATEGTASVLRRYGIDSKIVDK
ITARVDTDPDAPVEVRKAAGSIGKNVVELIEEGKIDLILNTPNSRGSRSDGYSIRAAAIA
ADVPQFTTMTEFAAVLLAIEAVKANDYQVMSIQEHARELFALERRAQDNG
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtaacgacatcaagtcggtaatggtcatcggctccggcccgatcgtcatc
ggtcaggccgccgagttcgactattcgggaacccaggcctgccgcgtcctgcgcgaggag
ggcatccgcgtcatcctcgtcaactccaacccggccacgatcatgaccgacccggagatg
gccgacgccacctacatcgagccgatcgccacgccgatcctcgaacgcatcatcgccaag
gagcgccccgacgcgctgctgccgacgctcggcggacagaccgcgctcaacgcggccgtc
gcgctcggcgaggccggcgtgctcaagaagtacaacgtcgagctcatcggcgcctcgctc
gaggcgatcgaccgcggtgaggaccgcgaatcgttcaagaaggtcgttgaggaggccggc
gccgagtcggcgcgctccgacatcgcgcacacgctcgaggaggtcgatgcgatcgccgaa
cgcttcgggttcccgctcgtcgtgcgcccgtcgttcacgatgggcggcctcggctccggc
atcgcgcacgacaccgaggagctgcaccgcatcgccggtgccggcatccattattcgccg
accgacgaggtgctcatcgaggagggcatcgagggctggaaggaatacgagctcgagctg
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgatcgagaacgtcgacccggtc
ggcgtgcacaccggcgactcgatcaccgtcgccccggtgttcacgctcaccgaccgcgaa
taccagaagctgcgcgacatcggcatcgcgatcatccgcggcgtcggcgtcgacaccggc
ggctgcaacattcagttcgcgatccacccgaagaccggccgcatcatcgtcatcgagatg
aacccgcgcgtctcgcgctcgtcggcgctcgcgtcgaaggccaccggcttcccgatcgcg
aagatcgcgacgaagctcgcgctcggctacacgctcgacgagatccagaacgacatcacg
aagtcgacgccggcgagcttcgaaccgacgatcgactacgtcgtcacgaaggtgccgcgc
ttcgcgttcgagaagttcccgggcgccgacccgacgctgacgacgtcgatgaagtcggtc
ggcgaggcgatggcgctcgccggcaacttcgaggagtcgctcggcaaggcgatgcgttcg
atcgacaagcgcgacatggccttctcgtgggacggcgacaagccgtccgccgacggggtc
gccgagctgctcgaggcgatgcgcacgccgaccgagcaccgctacctgcagctgatgcgc
gcgatctggggcggcgccaccgaggagcagatcttcgaggcgacgaagatcgacccgtgg
ttcatccgtcagttcacgcgcatcaacgacatggcgatgcaggtgcgcgccgccgagacg
ctgtcgccgcgcctgctcaagaaggcgaagctcgcgggcctgtccgacctgcagatcgcg
catctgcgcggcctgggcgacgccggcgagaacacgatccgcgaactgcgctggaactac
ggcctgcacccggtctacaagaccgtcgacacctgcgctgccgagttcgacgcggccacg
ccgtactactattcgtgctacgccgacgagaccgagctgcgccgccgcgaccgcgaggcc
gtcatcatcctcggatccggccccaaccgcatcggccagggcatcgagttcgactacacc
tgcgtgcacgcggtgcaggagctcggcaaggactatgacacgatcatggtcaactgcaac
ccggagaccgtctcgaccgactacgacatgtccgaccgcctctatttcgagccgctgacc
ttcgaggacgtcctcgagatctacgaagccgagaagaagatgggcccgatcaagggcgtt
atcgtgcagctcggcggccagacgccgctgtcgctcgccgcgcggctcaaggccgccggc
gtgccgatcctcggcacgacccccgaatcgatcgatctggccgagaaccgcgagctcttc
ggtgaggtgctgcgcgccgagaagctcaacgcgccgcgcttcggcaccgcgctcagcctc
ggcgaggcgctcgacgccgcgcacaacatcggctacccggtgctcgtgcgcccgagctac
gtgctcggcggacgcggcatggagatcgtttacgacgacgcccagctcgagaagtacgtc
aaccgcgcgctcgaccaggcgcaggccgacacggtcgtctccggacgcctgccctcgccg
ctgctcatcgacaagttcctgcaggatgcgatcgagatcgacgtcgacgcattgttcgac
ggccacgagctgtacatcggcggcatcatggaacacatcgaggaggctggcgtccactcc
ggcgacgcggcgtgcacgctgccgccaagcacgctgagcgacgaccagatccgccgtctg
cgcgaggcgacgctcgcgatcgccaagggctgcggcgtgcagggcctgatcaacgtgcag
tacgcgttcatggcgaacacgctctacgtcatcgaggcgaacccgcgcgcgtcgcgcacc
gtgcccttcgcgtcgaaggcaaccggcgtcgcgctcgcgaaggccgcggcgcgcatcatg
gtcggcgagacgatccagcagcagcgcgacaacggcctgctgctgccgcacggcgacggc
ggcgacgcgcgcatcggacagcaggtggccgtcaaggagtcggtgctgccgttcaagcgc
ttccgcacgccggtcggcaagaccgtcgacatcctgctcggacccgagatgcgttcgacc
ggcgaggtcatgggcttcgaccgcgacttcccgcacgccttcgcgaagagccagctttcg
gcgtacgagggcggcctgccgacctccggcaccgtcttcctctcggtcaacgacaccgac
aagcgccagctgccgctgttcgccgtgcgcctcgtcgagctcggcttcacgatctgcgcg
accgaaggcaccgcctcggtgctgcgccgctacggcatcgattcgaagatcgtcgacaag
atcacggcgcgcgtcgacaccgacccggacgccccggtcgaggtgcgcaaggcggccggc
agcatcggcaagaacgtcgtcgagctgatcgaggaaggcaagatcgacctcatcctcaac
acgccgaactcgcgtggttcgcgttcggacgggtattcgatccgcgccgcggcgatcgcc
gccgatgtgccgcagtttacgacgatgaccgaattcgctgcggtactattggcgatagag
gcggtcaaggcgaacgactaccaggtcatgagcatccaggagcatgcccgtgagctgttc
gccctcgaacgccgtgcgcaggacaacggataa
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