Bifidobacterium choerinum: BcFMB_05605
Help
Entry
BcFMB_05605 CDS
T05748
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bcho03051
]
BcFMB_05605
Enzymes [BR:
bcho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
BcFMB_05605
Proteasome [BR:
bcho03051
]
Prokaryotic proteasome
Bacterial regulatory particles
BcFMB_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
ATU21228
UniProt:
A0A2D3D7Y6
LinkDB
All DBs
Position
1423682..1425172
Genome browser
AA seq
496 aa
AA seq
DB search
MPQLHDSGNRGHVGARPSAHLDDFARIFGIETEYGLSVTGASRPCDAGQVAMMMFQPIMQ
RVRATNTYLTNGSRLYLDVGAHPEYATAEARTPGDATLADAAGEHIMRDLALDAQRRLRA
TLGQGATIHLFKNNADSAGHSFGCHENYLVRRGVALGQIETQLLPFLITRQILTGAGRFD
GVRWHVTQRAAFVDETVSSATTRSRPMINTRDEPHADPESFRRLHVIIGDSNRSQWATTM
KLATTHLVLCLMEWGARHGEETGLESIALADPVEANLAVDADGPRAALRLADGTTTTPLA
LQRRVLGAVLRFVRMRRDEVAASLDGDPLMTLDDVLGEWERGIETLAYDDEGAGLADRAD
WACKRRFAARLAARGAVDPMRLAQLDLDYHDIANGALFASLTRHGMMRALCDDARIERAV
TTPPAGTRAVLRGAFVAHAEAAPVAWSCDWTQLRLTAPVKDDVMILDPFDAVGDERYARL
LALIDGACGTGADMAV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgcacgacagcggcaaccgcggccacgtcggcgcgcgcccgtcggcgcat
ctcgacgacttcgcgcgcatcttcggcatcgagaccgaatacggactgagcgtcaccggc
gcgtcgcggccctgcgacgccggacaggtcgcgatgatgatgttccagccgatcatgcaa
cgcgtgcgcgcgacgaacacctacctgaccaacggctcgcggctctacctcgacgtcggc
gcgcaccccgaatacgcaaccgccgaggcgcgcacgcccggcgacgcgacgctcgccgac
gccgccggcgaacacatcatgcgcgatctggcgctcgacgcgcagcgccgcctgcgcgcg
acgctcgggcagggcgcgacgatccatctgttcaagaacaacgcggacagcgccggccac
tccttcggctgccacgagaactacctcgtgcgccgcggcgtcgcgctcggccagatcgag
acgcagctgctgccgttcctgatcacccgccagatcctcaccggcgcaggccgcttcgac
ggcgtccgctggcacgtcacgcagcgcgcggccttcgtcgacgagaccgtctcgtcggcg
acgacgcgctcgcggccgatgatcaacacgcgcgacgaaccgcatgccgaccctgagtcc
ttccgccgcctgcacgtcatcatcggcgactcgaaccgttcgcagtgggcgacgacgatg
aagctcgcgacgacgcatctcgtgctgtgcctgatggaatggggcgcgcggcacggcgag
gagaccgggctcgaatcgatcgcgctcgccgacccggtcgaggcgaacctcgccgtcgac
gccgacggtccgcgcgcggcgctgcgcctggccgacggcacgacgacgaccccgctcgcg
ctgcagcggcgcgtgctcggcgcggtgctgcgcttcgtgcgcatgcgccgcgacgaggtc
gccgcgtccctcgacggcgacccgctcatgacgctcgacgacgtgctcggcgaatgggag
cgcggcatcgagacgctcgcctacgacgacgagggggcagggctcgccgaccgcgccgac
tgggcgtgcaagcgccgtttcgcggcccggctcgccgcgcgaggcgccgtcgacccgatg
cgcctcgcacagctcgacctcgactaccacgacatcgccaacggcgcgctgttcgcctcg
ctcacgaggcatggcatgatgcgcgcgctgtgcgacgacgcgcggatcgaacgggccgtg
acgacgccgccggccggcacgcgcgccgtattgcgcggcgccttcgtcgcgcatgccgag
gcggcgccggtggcatggtcctgcgactggacgcagctgcggctcacggcgccggtgaag
gacgacgtcatgatcctcgaccccttcgacgccgtcggcgacgagcggtacgcgaggctg
ctcgccctgatcgacggggcgtgcggcaccggcgccgacatggccgtatga
DBGET
integrated database retrieval system
