Bifidobacterium choerinum: BcFMB_05610
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Entry
BcFMB_05610 CDS
T05748
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcho03032
]
BcFMB_05610
03036 Chromosome and associated proteins [BR:
bcho03036
]
BcFMB_05610
03400 DNA repair and recombination proteins [BR:
bcho03400
]
BcFMB_05610
DNA replication proteins [BR:
bcho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BcFMB_05610
Chromosome and associated proteins [BR:
bcho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BcFMB_05610
DNA repair and recombination proteins [BR:
bcho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BcFMB_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ATU20480
UniProt:
A0A087AHZ2
LinkDB
All DBs
Position
complement(1425264..1425545)
Genome browser
AA seq
93 aa
AA seq
DB search
MAYNKSDLVTKIAQKSHLTKAQAEAAVNAFQDVFVEAMKSGEGLKLTGLFSAERVKRAAR
TGRNPRTGETIEIPATYGVRISAGSLLKKAVTE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaacaagtctgatctcgtcaccaagatcgctcagaagtcccacctgaccaag
gctcaggctgaggccgccgtcaacgcattccaggatgtgttcgtcgaggccatgaagtcc
ggcgaaggcctgaagctgaccggtctgttctccgccgagcgcgtcaagcgcgccgcccgc
accggccgcaacccgcgcaccggcgagaccatcgagatcccggcgacctacggcgtgcgc
atctcggccggctccctgctgaagaaggccgtcaccgaatga
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integrated database retrieval system
