Bifidobacterium choerinum: BcFMB_06030
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Entry
BcFMB_06030 CDS
T05748
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcho03009
]
BcFMB_06030
Enzymes [BR:
bcho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
BcFMB_06030
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
BcFMB_06030
Ribosome biogenesis [BR:
bcho03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BcFMB_06030
23S rRNA modification factors
BcFMB_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_11
Methyltransf_25
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ATU21239
UniProt:
A0A2D3D7U8
LinkDB
All DBs
Position
1541142..1541858
Genome browser
AA seq
238 aa
AA seq
DB search
MTARALAPSRAKARRLVDDGHVYVDGVRAGKASMKVGDDARIEVRDADDYVSRGAYKLLG
AFDVFAADGLTGPRGLDCLDIGASTGGFCDVLLRGGARHVIALDVGHGQLDSRIADDARV
IEMSGVNIRNVEADDLPYRPQMIVSDVSFISLTYVLPVVARIAAPGAQVVLLVKPQFEVG
RAGLGKHGIVTDPAKRRAALDHVVECARAYGMHVVATAPSPIEGTHGNIEYLLYARTD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcgcgcgttggcgccgtcgcgcgcgaaggcgcggcgccttgtcgacgacggc
catgtgtacgtcgacggcgtgcgggcgggcaaggcgtcgatgaaggtcggcgatgacgcg
cgcatcgaggtgcgcgatgccgacgactatgtctcgcgcggcgcctacaagctgctcggc
gccttcgacgtcttcgccgccgacggactgacggggccgcgggggcttgactgcctcgac
atcggcgcgtcgacgggcggcttctgcgacgtgctgctgcgcgggggagcgcgccatgtg
atcgcgcttgacgtcggccacgggcagctcgattcgaggatcgccgacgacgcgcgcgtc
atcgagatgagcggcgtcaacatccgcaacgtcgaagccgacgatctgccgtaccgtccg
cagatgattgtctccgacgtctccttcatctcgctgacctatgtcctaccggtagtggcc
cgtatcgcggcacccggcgcgcaggtcgtgctgctcgtcaagccgcagttcgaagtggga
cgcgcagggctcggcaagcacggcatcgtcaccgatccggcgaagcgccgcgccgccctc
gaccacgtcgtcgaatgtgcccgcgcctacgggatgcacgtcgtggcgaccgccccgtcg
ccgatcgaaggcacccacggcaacatcgaatatctgctctacgcgcggacggactga
DBGET
integrated database retrieval system
