KEGG   Bifidobacterium choerinum: BcFMB_06965
Entry
BcFMB_06965       CDS       T05748                                 
Name
(GenBank) hypothetical protein
  KO
K06877  DEAD/DEAH box helicase domain-containing protein
Organism
bcho  Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09190 Not Included in Pathway or Brite
  09194 Poorly characterized
   99996 General function prediction only
    BcFMB_06965
SSDB
Motif
Pfam: DEAD Helicase_C MZB ResIII Phage_GPO Zf_2nd_IFT121
Other DBs
NCBI-ProteinID: ATU20703
UniProt: A0A2D3D6J2
LinkDB
Position
1756555..1763073
AA seq 2172 aa
MIPIVMARHIREGLVDYLETTYPMANKPFQGSIRRFAEAHDGLTLDPFVSVKLPFRVGDR
KEFPYDDCLHPSYAPYVHQLKAFKRIGNGESTLVATGTGSGKTECFLYPILHHCYKQRRL
GNTGIKAILVYPMNALAADQAKRIAQLIHDSPELRNNVTAGMYVGKSAADEQTASTVMSE
HAIISDHDALRRNPPDILLTNYKMLDYLLIRPQDSKLWDANDSETLKYFVVDELHTFDGA
QGTDLACLIRRLSDRLQTPCEDICFVGTSATMGSGPDDAHNLCDFASAVFHTPFTPESIV
TENRLDAEEFFDGTEPIHLIPSGEQALHLRELELDDDNPDIYLTQACRDLLGHDMPNPAD
PRSRIQLAAWLKQSDLLRQFAIALHNDPHMLDDDLLTEMGRQFHEFSHLQREEQLAVLDA
LVALVSHARIGEHGDGNLRPFLDVQVQLWTKELRQMRASVCGLDETVRYGSLYELDASRS
KQYLPIINCRICGNTGWVGNVNKQTQRIEAGEKSFANIYFQFRNNELAVMRPWNPTDASP
AGNAELGYFCPDADCMHFTRTEQFDAKERTCPSCGTDRIPMQMMGLESVGNERKHYRCPF
CGSDADLALLGFRATPQMSVMLTELIGDRYNDDDKTIVFSDSVQDAAFRASAFNSRTWRF
ALRNNAVDYLEGRWGGKTSLADYLDHQRLWYRKTYVDDVAFIMRFAPANMTWMDEYRRAA
QGVAPGGRRHDLIEQIGKRLRIETLHELGSRSRIGRTLEKTGCAVLGYDEHTLEAIAQDA
SARACAELGDDVRLETDDDWLHLTLDLLNTLRLGGAFIDPLYERYIEEGGTPYLLSNKHL
PWMPGSYVKSEPHFLTNRRSTSKTGFYALTEGRYAHIVDRYLTDTLMLAGNEPRIILEQL
LQACVEHGVIAVRKCTRTRFGEQQVYGIDESQCHVTDEVVALHCDSCGRTYDGAQGNERA
WNGLHCMNPYCRGRLVPADANQDWGYYHRLYHTTPPAPRIHAAEHTGLVDAETRNKLESQ
FKQNTSGAGDVNVLACTPTLEMGIDIGDLSTVILSSIPPSQSQYLQRVGRAGRRDGNALV
LAVANGRPHDRYFYNRAQEMISGHVRPPHVFLQASAVLERQLTAFAMDRWVHACLMQGME
PRDIIRKKLEHSLEVMTTKANGFPLSFLDYTSTHTAELLQAFQAMFSTEDTTMDATLEQS
LRLFLEGGTTGMTEHPTLAARIVAAFDAAKNMIANLETQRRELEELKKELKAKPQDSSTD
SQIHECDIEIKVVDRNIRAIKKTNVFNYMSNEGILPNYAFPEGGVTLHTVLKAEAESPDQ
KPGAKDRAGTRTSRKVQTGTYERPAMTAITELAPGNTFYAQGHKFEINRVLYDDGAMNQD
IPVWRLCPNCSHAEPKSEVGNTATCPVCGDPRWAENGQCMPMLRISNVISEETYRESLID
EGDDTRSRSMFQTDVLVDIKPRDTKNAWKLNGATDFGYEYVPHGTLREINFGEADNQGAK
MTINGIEEVRKGFLVCSSCGALADKNGRIPPKRHAYTCPNRRGLEKADGQQCLFLYREFN
TEMLRLLVPGIADVRGNNAAAASFSAAIMLGLRNKFGNIDHLNAVLSNEPALDGTNIRKT
YLVIYDEVPGGTGYLKQLGADSDTMDEVLRDAFVTIDECDYCRSNNTDGCYNCLLGWRQE
QQFDEISRSLALEMLGPIVNDAHTFEQVATVSDISVNHLLDSVLEQQFLEALSRTCSAPL
TKSYEGRGARCKWEKQSSLQHREGYLLTVNGLEWEIDLQVDLGPAQGVAVPCRPDFIIRR
VGNGERAAIAVFTDGLQFHAPIVGEDTLKREALRRAGYRVWTLTYDDVMGFLNQKEPTKL
ADPTLDINAMPWKTSCRKLMRQNGVAGIDPGCYGTMDLLAFQLTVPDAEKKMRDVANAFS
WGFFDRQHQCTGTAITQFERTVEDIAGLRGGDLVRCSAYEPDHDDSRLAVCCYATQEDGP
EGVARILLRFDDALADDGRVPSQELWESCSPQEREDFKRQWSSFWHLANVLQYSGHLTFV
TDFAIDAQMYLPLIEQARRNARAMQVPDSGDWQPVFDGENFQYLDEACQEQVYKLARMHL
IVPDAVASEAADADGISLGEAALIWDKARFVFIPDGYNDEVQATRDAYAAAGWNVITDAD
ERQTAPLRSEDR
NT seq 6519 nt   +upstreamnt  +downstreamnt
atgattccgatcgtgatggcgcggcatatccgcgaaggtctcgtcgactacttggagacg
acgtatccgatggcgaacaagcccttccaagggtccatccgacggttcgccgaagcgcac
gacggactgacgctcgatcccttcgtatcggtcaaactgccgttccgcgtaggggacagg
aaggaattcccctacgacgactgcctgcatccgtcatacgccccgtacgtgcaccagttg
aaggccttcaagcgcatcggcaacggcgaatccacactcgtggccaccggtaccggttca
ggcaagaccgaatgcttcctgtacccgatcctgcatcactgctacaagcagcgcagactc
ggcaacaccggcatcaaggcgatcctcgtctatccgatgaacgcgctcgccgccgaccag
gcgaagcgcatcgcacaactgatccatgacagtcccgaactgcgcaacaacgtgaccgcc
ggcatgtacgtcggcaaaagcgccgccgatgagcagactgcaagcaccgtcatgtccgag
catgcgatcatctccgaccatgacgcgttgcggcgcaacccaccggacatcctgctgacg
aactacaagatgctcgactatctgctcatccgtccgcaggactccaaactctgggacgcc
aacgattcagagacgctcaaatacttcgtcgtcgacgagctgcacaccttcgacggagcg
cagggcaccgacctggcctgtctcatccgccggctttccgacaggttgcagacgccgtgc
gaggacatctgcttcgtcggcacatccgccacgatgggctcggggcccgatgatgcacac
aacctgtgcgacttcgcctccgccgtgttccacacgccgttcacgccggaaagcatcgtc
accgagaaccgtctcgacgccgaggagttcttcgacgggacagaaccgatccatctgatt
ccctccggcgagcaagcgctgcatctgcgggagctggaactggatgatgacaatcccgac
atctatctgacgcaggcatgccgggacctcctcggccatgatatgcccaatccagccgat
ccgcgcagccggatacaactcgccgcatggctcaaacaaagcgatctgctgcgccagttc
gccatcgctctgcacaacgatccgcacatgctcgacgacgacctgctcacggagatgggg
cgccaattccacgaattcagccatctgcagcgcgaggagcagcttgcggtgctcgacgcc
ctcgtcgcattggtcagtcatgcgcgcatcggcgaacacggcgacgggaacctacgaccg
ttccttgacgtgcaggtgcagctgtggacgaaggaactgcgccagatgcgcgcatccgtg
tgcggtctggacgaaaccgtacgatacggcagcctctacgaattggacgcatcacgatcc
aaacagtatctgccgatcatcaactgccgcatatgcggcaacaccggctgggtaggcaac
gtcaacaagcagacgcaacgaatcgaagcgggggagaagagcttcgccaacatctacttc
cagttcagaaacaatgagctcgcggtcatgaggccatggaacccgacggacgcatcaccg
gccggcaacgccgaactggggtatttctgtccggatgcagactgtatgcacttcacccgt
accgaacagttcgacgccaaggagcgtacatgtccctcatgcggcaccgaccgcatcccg
atgcagatgatggggctcgaaagcgtcggcaacgaacgcaagcactaccgttgcccgttc
tgcggcagcgacgccgatctggcgctgctgggcttccgcgccacaccgcagatgagcgtc
atgctcaccgaactcatcggcgaccgatacaacgacgacgacaagacgatcgtcttctcg
gacagcgtgcaggacgccgcattccgcgcgagcgcgttcaactcgcgcacatggcgcttc
gcgctgcgcaacaacgctgtcgactaccttgaagggagatggggcggcaagacttcgctt
gccgactatctcgaccatcagcggctctggtaccgcaagacgtatgtggacgacgtcgcc
ttcatcatgcgcttcgctcccgcgaacatgacgtggatggacgagtaccggcgcgcggcg
caaggcgtcgcgcccggcggtcgtcgtcacgacctgatcgaacagatcggcaagcgtctg
cgcatcgaaacgctgcatgaactcgggtcccgttcccgcatcggacgaacgctggagaag
accggatgcgccgtgctgggctacgacgagcacacgctcgaggccatcgcgcaggacgcg
tcggcccgtgcgtgcgccgaactcggggacgatgtccgtctcgaaactgacgacgactgg
ctgcatctgaccttggatctgctcaatacgctgcgtctcggcggcgcgttcatcgaccca
ttgtatgaacggtacatcgaagaaggcggcaccccctatctgctgtcgaacaagcatctg
ccatggatgccgggaagctatgtgaaatccgaaccgcatttcctcaccaatcgacgatcc
acgtcgaaaaccggattctacgcgctcaccgaaggcaggtatgcgcacatcgtggacagg
tatctgaccgatacgctcatgctcgccggcaatgagccgcgaatcatcctcgaacagctg
ctgcaggcctgcgtcgagcatggcgtgatcgcggtcaggaaatgcacgcggacaagattc
ggcgaacaacaggtgtacggcatcgatgaatcgcaatgccatgtgaccgacgaggtcgtc
gcgttgcactgcgactcgtgcggacgcacctatgacggcgcgcagggcaacgagcgggca
tggaacggtctgcactgcatgaatccctactgccggggacggttggttcccgccgatgcg
aatcaggattggggctactatcacaggctgtatcacacgacgccgccggcgccgcgcatc
catgcggccgaacacaccggtctcgtggacgccgagacccgcaacaagctcgaatcgcag
ttcaaacagaacacatccggagcaggggacgtgaacgtactcgcctgcacgccgacactc
gaaatgggcatcgacatcggagacctgtccacggtgattctttcgtcgattccacccagc
caatcgcagtatctgcaacgtgtaggccgtgcgggacgccgcgatggcaacgcgctcgtg
ctcgccgtggccaacgggcgcccccatgaccggtacttctacaacagggcacaggagatg
ataagcggccatgtgcgcccgccacacgtgttcctgcaggcgagcgccgtgctcgaacgc
cagctcaccgccttcgccatggaccgttgggtgcatgcatgtctcatgcagggcatggaa
ccaagggacatcatcaggaagaaactcgagcacagccttgaagtcatgaccacgaaggcg
aacggcttcccgctgtcgttcctcgactacacgagcacgcacaccgccgagctgctccag
gcgttccaggcgatgttctccaccgaggacacgacgatggacgccacgttggaacagtca
ctgcgcctgttcctcgaaggcggcacgaccggcatgactgaacatccgacgctcgccgca
cgcatcgtcgcggcgttcgacgccgcgaaaaacatgatcgcgaacctcgaaacacagcgt
agggaactcgaggagctcaagaaggaactcaaagccaagccgcaggattcctcgaccgac
tcgcagatccacgaatgcgacatcgagatcaaggtggtggataggaatatccgcgccatc
aagaagaccaacgtcttcaactacatgtccaacgagggaatcctgccgaactacgcgttc
cccgaaggcggcgtcacgctgcacaccgtgctcaaagcggaagcggagagcccggaccaa
aaacccggagcaaaggacagggccggaacgcggacgagcaggaaagtgcagaccggcaca
tacgaacggccggcgatgacggcgatcaccgaactcgcgccgggcaacacgttctatgcg
caaggccacaagtttgagattaaccgtgtcctgtacgacgacggtgccatgaaccaggac
atccccgtatggcgactgtgtcccaactgttcgcacgcggaacccaaatccgaagtcggc
aacaccgccacctgccccgtatgtggcgacccgcgatgggctgagaacggccaatgcatg
ccgatgctgcgcatcagcaacgtcatctccgaggaaacctaccgcgaaagcctcatcgac
gaaggcgacgatacgcgcagccgttcgatgttccagacggacgtgctcgtcgacatcaag
ccccgggatacgaagaacgcgtggaagctgaacggtgccaccgacttcggctatgaatac
gtgccacatggcacattgcgggagatcaacttcggtgaagccgacaatcagggtgcgaag
atgaccatcaacggcatcgaggaggtacgcaaaggattcctcgtatgcagttcatgcggc
gcgctcgcggacaagaacggcaggatcccgccgaaacgccatgcctacacatgtcctaac
agaagaggactggagaaggcggacggacagcaatgcctgttcctgtaccgtgagttcaac
accgaaatgctcagactgctcgtccccggcatcgccgacgtacgcggcaacaacgcggcg
gcggcgtcgttttcggcggcgatcatgctcggtctgcgcaacaaattcggcaacatcgac
catctcaacgccgtattgagcaacgaaccggcattggacggcacgaacattcgcaagacg
tatcttgtcatatacgacgaggttcctggaggaaccggatacctcaagcagctcggcgcc
gacagcgacacgatggatgaagtgctccgcgacgcgttcgtgaccatcgacgaatgcgac
tactgccgcagcaacaacaccgacggttgttacaattgtctgctcggctggcgtcaggaa
cagcagttcgacgagatctcacgttcccttgcgctcgagatgctcggcccgatcgtcaac
gatgcgcacaccttcgaacaggtcgctacggtgagcgacatctcggtgaaccatctgctc
gacagcgtcctcgaacagcagttcctggaagcattgtccagaacctgttcggcgccattg
actaaatcctacgaggggcgcggcgcacgatgcaagtgggagaagcaatcctctctacag
catcgtgaaggctatctgcttaccgtcaacggacttgaatgggagatcgacctgcaggtc
gatctgggtcctgcacaaggtgtggcggtgccctgcaggccagatttcatcatccgtcgc
gtaggcaatggcgagagagcggcaatcgccgtgttcaccgatggacttcagttccatgcg
ccgatcgtcggcgaggacacgctcaaacgtgaggcgttgcgacgcgccggctaccgtgta
tggaccctgacctatgacgatgtgatgggcttcctcaaccagaaggagccgaccaaatta
gcagacccgacgctggacatcaatgcgatgccatggaagaccagctgtcgcaaactcatg
cgacagaacggcgtagcgggcatcgatccgggatgctatgggacgatggacctgctggcg
ttccagttgaccgtccccgatgctgagaagaagatgcgggacgttgccaacgccttcagc
tggggtttcttcgatcggcagcaccaatgcaccggaacggccattacgcaattcgaacgt
acggtggaggacatcgccggactgcgcggcggcgatctggtgcgatgctcggcgtacgaa
cccgaccatgacgacagccgacttgccgtatgctgctatgcgacacaggaggatggcccc
gaaggcgtcgcccgcatcctcctgcgcttcgatgacgcgctcgcggatgacgggcgtgtg
ccgagtcaggaactgtgggaatcatgctccccgcaggaacgtgaggatttcaaacgacag
tggagcagtttctggcatctcgccaacgtgctgcagtactcgggacatcttacgttcgtg
acggatttcgccatcgacgcgcagatgtatctgccgttgatcgagcaagccagacgcaat
gcccgtgccatgcaggtgccggactcgggcgactggcagccggtcttcgacggcgagaac
ttccagtatctcgacgaggcatgtcaggaacaggtatacaagctcgcgcgcatgcatctc
atcgtccccgatgccgtcgccagcgaagcggcggatgcggacggcatcagtctgggcgaa
gccgcgctgatatgggacaaggcgaggttcgtgttcatccccgacggctacaacgacgag
gtgcaggccacccgtgatgcgtatgcagccgccggctggaacgtcatcaccgatgcggat
gaacggcagacggcgccattgcgaagtgaagaccgataa

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