Bifidobacterium choerinum: BcFMB_06965
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Entry
BcFMB_06965 CDS
T05748
Name
(GenBank) hypothetical protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
BcFMB_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Phage_GPO
Zf_2nd_IFT121
Motif
Other DBs
NCBI-ProteinID:
ATU20703
UniProt:
A0A2D3D6J2
LinkDB
All DBs
Position
1756555..1763073
Genome browser
AA seq
2172 aa
AA seq
DB search
MIPIVMARHIREGLVDYLETTYPMANKPFQGSIRRFAEAHDGLTLDPFVSVKLPFRVGDR
KEFPYDDCLHPSYAPYVHQLKAFKRIGNGESTLVATGTGSGKTECFLYPILHHCYKQRRL
GNTGIKAILVYPMNALAADQAKRIAQLIHDSPELRNNVTAGMYVGKSAADEQTASTVMSE
HAIISDHDALRRNPPDILLTNYKMLDYLLIRPQDSKLWDANDSETLKYFVVDELHTFDGA
QGTDLACLIRRLSDRLQTPCEDICFVGTSATMGSGPDDAHNLCDFASAVFHTPFTPESIV
TENRLDAEEFFDGTEPIHLIPSGEQALHLRELELDDDNPDIYLTQACRDLLGHDMPNPAD
PRSRIQLAAWLKQSDLLRQFAIALHNDPHMLDDDLLTEMGRQFHEFSHLQREEQLAVLDA
LVALVSHARIGEHGDGNLRPFLDVQVQLWTKELRQMRASVCGLDETVRYGSLYELDASRS
KQYLPIINCRICGNTGWVGNVNKQTQRIEAGEKSFANIYFQFRNNELAVMRPWNPTDASP
AGNAELGYFCPDADCMHFTRTEQFDAKERTCPSCGTDRIPMQMMGLESVGNERKHYRCPF
CGSDADLALLGFRATPQMSVMLTELIGDRYNDDDKTIVFSDSVQDAAFRASAFNSRTWRF
ALRNNAVDYLEGRWGGKTSLADYLDHQRLWYRKTYVDDVAFIMRFAPANMTWMDEYRRAA
QGVAPGGRRHDLIEQIGKRLRIETLHELGSRSRIGRTLEKTGCAVLGYDEHTLEAIAQDA
SARACAELGDDVRLETDDDWLHLTLDLLNTLRLGGAFIDPLYERYIEEGGTPYLLSNKHL
PWMPGSYVKSEPHFLTNRRSTSKTGFYALTEGRYAHIVDRYLTDTLMLAGNEPRIILEQL
LQACVEHGVIAVRKCTRTRFGEQQVYGIDESQCHVTDEVVALHCDSCGRTYDGAQGNERA
WNGLHCMNPYCRGRLVPADANQDWGYYHRLYHTTPPAPRIHAAEHTGLVDAETRNKLESQ
FKQNTSGAGDVNVLACTPTLEMGIDIGDLSTVILSSIPPSQSQYLQRVGRAGRRDGNALV
LAVANGRPHDRYFYNRAQEMISGHVRPPHVFLQASAVLERQLTAFAMDRWVHACLMQGME
PRDIIRKKLEHSLEVMTTKANGFPLSFLDYTSTHTAELLQAFQAMFSTEDTTMDATLEQS
LRLFLEGGTTGMTEHPTLAARIVAAFDAAKNMIANLETQRRELEELKKELKAKPQDSSTD
SQIHECDIEIKVVDRNIRAIKKTNVFNYMSNEGILPNYAFPEGGVTLHTVLKAEAESPDQ
KPGAKDRAGTRTSRKVQTGTYERPAMTAITELAPGNTFYAQGHKFEINRVLYDDGAMNQD
IPVWRLCPNCSHAEPKSEVGNTATCPVCGDPRWAENGQCMPMLRISNVISEETYRESLID
EGDDTRSRSMFQTDVLVDIKPRDTKNAWKLNGATDFGYEYVPHGTLREINFGEADNQGAK
MTINGIEEVRKGFLVCSSCGALADKNGRIPPKRHAYTCPNRRGLEKADGQQCLFLYREFN
TEMLRLLVPGIADVRGNNAAAASFSAAIMLGLRNKFGNIDHLNAVLSNEPALDGTNIRKT
YLVIYDEVPGGTGYLKQLGADSDTMDEVLRDAFVTIDECDYCRSNNTDGCYNCLLGWRQE
QQFDEISRSLALEMLGPIVNDAHTFEQVATVSDISVNHLLDSVLEQQFLEALSRTCSAPL
TKSYEGRGARCKWEKQSSLQHREGYLLTVNGLEWEIDLQVDLGPAQGVAVPCRPDFIIRR
VGNGERAAIAVFTDGLQFHAPIVGEDTLKREALRRAGYRVWTLTYDDVMGFLNQKEPTKL
ADPTLDINAMPWKTSCRKLMRQNGVAGIDPGCYGTMDLLAFQLTVPDAEKKMRDVANAFS
WGFFDRQHQCTGTAITQFERTVEDIAGLRGGDLVRCSAYEPDHDDSRLAVCCYATQEDGP
EGVARILLRFDDALADDGRVPSQELWESCSPQEREDFKRQWSSFWHLANVLQYSGHLTFV
TDFAIDAQMYLPLIEQARRNARAMQVPDSGDWQPVFDGENFQYLDEACQEQVYKLARMHL
IVPDAVASEAADADGISLGEAALIWDKARFVFIPDGYNDEVQATRDAYAAAGWNVITDAD
ERQTAPLRSEDR
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgattccgatcgtgatggcgcggcatatccgcgaaggtctcgtcgactacttggagacg
acgtatccgatggcgaacaagcccttccaagggtccatccgacggttcgccgaagcgcac
gacggactgacgctcgatcccttcgtatcggtcaaactgccgttccgcgtaggggacagg
aaggaattcccctacgacgactgcctgcatccgtcatacgccccgtacgtgcaccagttg
aaggccttcaagcgcatcggcaacggcgaatccacactcgtggccaccggtaccggttca
ggcaagaccgaatgcttcctgtacccgatcctgcatcactgctacaagcagcgcagactc
ggcaacaccggcatcaaggcgatcctcgtctatccgatgaacgcgctcgccgccgaccag
gcgaagcgcatcgcacaactgatccatgacagtcccgaactgcgcaacaacgtgaccgcc
ggcatgtacgtcggcaaaagcgccgccgatgagcagactgcaagcaccgtcatgtccgag
catgcgatcatctccgaccatgacgcgttgcggcgcaacccaccggacatcctgctgacg
aactacaagatgctcgactatctgctcatccgtccgcaggactccaaactctgggacgcc
aacgattcagagacgctcaaatacttcgtcgtcgacgagctgcacaccttcgacggagcg
cagggcaccgacctggcctgtctcatccgccggctttccgacaggttgcagacgccgtgc
gaggacatctgcttcgtcggcacatccgccacgatgggctcggggcccgatgatgcacac
aacctgtgcgacttcgcctccgccgtgttccacacgccgttcacgccggaaagcatcgtc
accgagaaccgtctcgacgccgaggagttcttcgacgggacagaaccgatccatctgatt
ccctccggcgagcaagcgctgcatctgcgggagctggaactggatgatgacaatcccgac
atctatctgacgcaggcatgccgggacctcctcggccatgatatgcccaatccagccgat
ccgcgcagccggatacaactcgccgcatggctcaaacaaagcgatctgctgcgccagttc
gccatcgctctgcacaacgatccgcacatgctcgacgacgacctgctcacggagatgggg
cgccaattccacgaattcagccatctgcagcgcgaggagcagcttgcggtgctcgacgcc
ctcgtcgcattggtcagtcatgcgcgcatcggcgaacacggcgacgggaacctacgaccg
ttccttgacgtgcaggtgcagctgtggacgaaggaactgcgccagatgcgcgcatccgtg
tgcggtctggacgaaaccgtacgatacggcagcctctacgaattggacgcatcacgatcc
aaacagtatctgccgatcatcaactgccgcatatgcggcaacaccggctgggtaggcaac
gtcaacaagcagacgcaacgaatcgaagcgggggagaagagcttcgccaacatctacttc
cagttcagaaacaatgagctcgcggtcatgaggccatggaacccgacggacgcatcaccg
gccggcaacgccgaactggggtatttctgtccggatgcagactgtatgcacttcacccgt
accgaacagttcgacgccaaggagcgtacatgtccctcatgcggcaccgaccgcatcccg
atgcagatgatggggctcgaaagcgtcggcaacgaacgcaagcactaccgttgcccgttc
tgcggcagcgacgccgatctggcgctgctgggcttccgcgccacaccgcagatgagcgtc
atgctcaccgaactcatcggcgaccgatacaacgacgacgacaagacgatcgtcttctcg
gacagcgtgcaggacgccgcattccgcgcgagcgcgttcaactcgcgcacatggcgcttc
gcgctgcgcaacaacgctgtcgactaccttgaagggagatggggcggcaagacttcgctt
gccgactatctcgaccatcagcggctctggtaccgcaagacgtatgtggacgacgtcgcc
ttcatcatgcgcttcgctcccgcgaacatgacgtggatggacgagtaccggcgcgcggcg
caaggcgtcgcgcccggcggtcgtcgtcacgacctgatcgaacagatcggcaagcgtctg
cgcatcgaaacgctgcatgaactcgggtcccgttcccgcatcggacgaacgctggagaag
accggatgcgccgtgctgggctacgacgagcacacgctcgaggccatcgcgcaggacgcg
tcggcccgtgcgtgcgccgaactcggggacgatgtccgtctcgaaactgacgacgactgg
ctgcatctgaccttggatctgctcaatacgctgcgtctcggcggcgcgttcatcgaccca
ttgtatgaacggtacatcgaagaaggcggcaccccctatctgctgtcgaacaagcatctg
ccatggatgccgggaagctatgtgaaatccgaaccgcatttcctcaccaatcgacgatcc
acgtcgaaaaccggattctacgcgctcaccgaaggcaggtatgcgcacatcgtggacagg
tatctgaccgatacgctcatgctcgccggcaatgagccgcgaatcatcctcgaacagctg
ctgcaggcctgcgtcgagcatggcgtgatcgcggtcaggaaatgcacgcggacaagattc
ggcgaacaacaggtgtacggcatcgatgaatcgcaatgccatgtgaccgacgaggtcgtc
gcgttgcactgcgactcgtgcggacgcacctatgacggcgcgcagggcaacgagcgggca
tggaacggtctgcactgcatgaatccctactgccggggacggttggttcccgccgatgcg
aatcaggattggggctactatcacaggctgtatcacacgacgccgccggcgccgcgcatc
catgcggccgaacacaccggtctcgtggacgccgagacccgcaacaagctcgaatcgcag
ttcaaacagaacacatccggagcaggggacgtgaacgtactcgcctgcacgccgacactc
gaaatgggcatcgacatcggagacctgtccacggtgattctttcgtcgattccacccagc
caatcgcagtatctgcaacgtgtaggccgtgcgggacgccgcgatggcaacgcgctcgtg
ctcgccgtggccaacgggcgcccccatgaccggtacttctacaacagggcacaggagatg
ataagcggccatgtgcgcccgccacacgtgttcctgcaggcgagcgccgtgctcgaacgc
cagctcaccgccttcgccatggaccgttgggtgcatgcatgtctcatgcagggcatggaa
ccaagggacatcatcaggaagaaactcgagcacagccttgaagtcatgaccacgaaggcg
aacggcttcccgctgtcgttcctcgactacacgagcacgcacaccgccgagctgctccag
gcgttccaggcgatgttctccaccgaggacacgacgatggacgccacgttggaacagtca
ctgcgcctgttcctcgaaggcggcacgaccggcatgactgaacatccgacgctcgccgca
cgcatcgtcgcggcgttcgacgccgcgaaaaacatgatcgcgaacctcgaaacacagcgt
agggaactcgaggagctcaagaaggaactcaaagccaagccgcaggattcctcgaccgac
tcgcagatccacgaatgcgacatcgagatcaaggtggtggataggaatatccgcgccatc
aagaagaccaacgtcttcaactacatgtccaacgagggaatcctgccgaactacgcgttc
cccgaaggcggcgtcacgctgcacaccgtgctcaaagcggaagcggagagcccggaccaa
aaacccggagcaaaggacagggccggaacgcggacgagcaggaaagtgcagaccggcaca
tacgaacggccggcgatgacggcgatcaccgaactcgcgccgggcaacacgttctatgcg
caaggccacaagtttgagattaaccgtgtcctgtacgacgacggtgccatgaaccaggac
atccccgtatggcgactgtgtcccaactgttcgcacgcggaacccaaatccgaagtcggc
aacaccgccacctgccccgtatgtggcgacccgcgatgggctgagaacggccaatgcatg
ccgatgctgcgcatcagcaacgtcatctccgaggaaacctaccgcgaaagcctcatcgac
gaaggcgacgatacgcgcagccgttcgatgttccagacggacgtgctcgtcgacatcaag
ccccgggatacgaagaacgcgtggaagctgaacggtgccaccgacttcggctatgaatac
gtgccacatggcacattgcgggagatcaacttcggtgaagccgacaatcagggtgcgaag
atgaccatcaacggcatcgaggaggtacgcaaaggattcctcgtatgcagttcatgcggc
gcgctcgcggacaagaacggcaggatcccgccgaaacgccatgcctacacatgtcctaac
agaagaggactggagaaggcggacggacagcaatgcctgttcctgtaccgtgagttcaac
accgaaatgctcagactgctcgtccccggcatcgccgacgtacgcggcaacaacgcggcg
gcggcgtcgttttcggcggcgatcatgctcggtctgcgcaacaaattcggcaacatcgac
catctcaacgccgtattgagcaacgaaccggcattggacggcacgaacattcgcaagacg
tatcttgtcatatacgacgaggttcctggaggaaccggatacctcaagcagctcggcgcc
gacagcgacacgatggatgaagtgctccgcgacgcgttcgtgaccatcgacgaatgcgac
tactgccgcagcaacaacaccgacggttgttacaattgtctgctcggctggcgtcaggaa
cagcagttcgacgagatctcacgttcccttgcgctcgagatgctcggcccgatcgtcaac
gatgcgcacaccttcgaacaggtcgctacggtgagcgacatctcggtgaaccatctgctc
gacagcgtcctcgaacagcagttcctggaagcattgtccagaacctgttcggcgccattg
actaaatcctacgaggggcgcggcgcacgatgcaagtgggagaagcaatcctctctacag
catcgtgaaggctatctgcttaccgtcaacggacttgaatgggagatcgacctgcaggtc
gatctgggtcctgcacaaggtgtggcggtgccctgcaggccagatttcatcatccgtcgc
gtaggcaatggcgagagagcggcaatcgccgtgttcaccgatggacttcagttccatgcg
ccgatcgtcggcgaggacacgctcaaacgtgaggcgttgcgacgcgccggctaccgtgta
tggaccctgacctatgacgatgtgatgggcttcctcaaccagaaggagccgaccaaatta
gcagacccgacgctggacatcaatgcgatgccatggaagaccagctgtcgcaaactcatg
cgacagaacggcgtagcgggcatcgatccgggatgctatgggacgatggacctgctggcg
ttccagttgaccgtccccgatgctgagaagaagatgcgggacgttgccaacgccttcagc
tggggtttcttcgatcggcagcaccaatgcaccggaacggccattacgcaattcgaacgt
acggtggaggacatcgccggactgcgcggcggcgatctggtgcgatgctcggcgtacgaa
cccgaccatgacgacagccgacttgccgtatgctgctatgcgacacaggaggatggcccc
gaaggcgtcgcccgcatcctcctgcgcttcgatgacgcgctcgcggatgacgggcgtgtg
ccgagtcaggaactgtgggaatcatgctccccgcaggaacgtgaggatttcaaacgacag
tggagcagtttctggcatctcgccaacgtgctgcagtactcgggacatcttacgttcgtg
acggatttcgccatcgacgcgcagatgtatctgccgttgatcgagcaagccagacgcaat
gcccgtgccatgcaggtgccggactcgggcgactggcagccggtcttcgacggcgagaac
ttccagtatctcgacgaggcatgtcaggaacaggtatacaagctcgcgcgcatgcatctc
atcgtccccgatgccgtcgccagcgaagcggcggatgcggacggcatcagtctgggcgaa
gccgcgctgatatgggacaaggcgaggttcgtgttcatccccgacggctacaacgacgag
gtgcaggccacccgtgatgcgtatgcagccgccggctggaacgtcatcaccgatgcggat
gaacggcagacggcgccattgcgaagtgaagaccgataa
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