Bifidobacterium choerinum: BcFMB_07460
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Entry
BcFMB_07460 CDS
T05748
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00260
Glycine, serine and threonine metabolism
bcho00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bcho01100
Metabolic pathways
bcho01110
Biosynthesis of secondary metabolites
bcho01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BcFMB_07460
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
BcFMB_07460
Enzymes [BR:
bcho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
BcFMB_07460
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IGPS
PALP
QRPTase_C
RhsPI
Motif
Other DBs
NCBI-ProteinID:
ATU20780
UniProt:
A0A087AEE8
LinkDB
All DBs
Position
complement(1859315..1861399)
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AA seq
694 aa
AA seq
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MSVLDELVAGALEDQRDRARVTSLDELKAMAASAPAPMDAKRWLRRDDGVPVIAEIKRAS
PSKGHLTDIDDPGSLACEYARGGASAISVLTEGRRFLGSLDDLDAVRAAVDIPVLRKDFI
ATDYQIWEARAHGADIILLIVAALDDDTLGRLLALTHELGMTALVETHTRQEIERAIASG
AQVIGINARNLKDLRVDVGRYAELADDLPDDVIKVAESGVFGETEVEDYARAGADAVLVG
EGVATADDHELAVERLVKAGAKVKASEAQPLSTHHGPYYGRFGGRYVPEALVTALDELER
VYEDAKRDPEFHKELARLNKQYVGRPSPLTEAPRFAERLRERTGLDARVFLKREDLNHTG
AHKINNAIGQALLVKRMGKTRVIAETGAGQHGVATATVCAMLGLKCRIYMGQIDARRQAL
NVARMRMLGAEVVEVTLGDRILKDAINEALRDWVTNVRDTHYLLGTVAGPHPFPEMVRDF
QKVIGEEAKEQLRDWYGIDHPDAICACVGGGSNAIGIMNAFLDDPRVNLYGYEAGGDGPE
SGRHAIRFAPGTGELGMFQGAKSYLLENDEGQTLDTYSISAGLDYASVGPEHAWLKEIGR
VNYSWATDGEAMSAFKDLCETEGIIPAIESSHAVAGAYKAAADLKTRGYEHPVMIINISG
RGDKDMNTAGKWFGYLTDEQSKALEANGAQGNNA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttttggatgaactggtagcgggcgcgctcgaggatcagcgcgaccgcgcacgt
gtcacgtcgctggacgagctcaaggccatggcggcctcggctccggccccgatggacgcg
aagcgatggctcaggcgcgacgacggcgtaccggtgatcgccgagatcaaacgcgcatcc
ccgtccaagggccatctgaccgacatcgacgaccccggctcgctcgcctgcgaatacgcg
cgcggcggcgccagcgcaatctcggtgctcaccgaaggccggcgcttcctcggttcgctc
gacgatctggacgccgtgcgcgccgccgtggacatccccgtgctgcgcaaggacttcatc
gcgaccgactaccagatctgggaggcgcgcgcgcacggcgcggacatcatcctgctcatc
gtcgccgcgctcgacgacgacacgctcggccgtctgctcgccctcacccatgagctcggc
atgacggcgctcgtcgagacgcacacccgtcaggagatcgaacgggcgattgcctccggc
gcgcaggtcatcggcatcaacgcgcgcaacctcaaggatctgcgcgtcgacgtcggccgg
tacgcggagctcgccgacgacctgcccgacgacgtcatcaaggtggcggaatcgggcgtc
ttcggcgaaacggaggtcgaggactacgcgcgcgccggcgcggacgccgtgctcgtcggc
gaaggcgtggccacggccgacgaccatgaactcgcagtagaacgtctagtgaaagcagga
gccaaggtgaaggcctcggaagcacagccactcagcacccatcacggtccgtattacgga
cgcttcggtggacggtacgtccccgaggcgctcgtcacagcgctcgacgagctcgaacgg
gtgtacgaggacgccaagcgcgacccggagttccacaaggagctcgcacgtctcaacaag
cagtacgtgggacgcccgtcgccgctcaccgaagcgccgcgcttcgccgaacgcctgcgc
gaacgcaccggcctcgacgcgcgcgtcttcctcaagcgcgaggacctcaaccacaccggc
gcgcacaagatcaacaacgcgatcggtcaggcgctgctcgtcaagcgcatgggcaagacg
cgcgtcatcgccgagaccggcgccggccagcacggcgtcgcgacggccaccgtgtgcgcg
atgctcggcctcaaatgccgcatctacatgggccagatcgacgcgcgccgccaggcgctc
aacgtcgcgcgcatgcgcatgctcggcgccgaggtcgtcgaggtcacgctcggcgaccgc
attctcaaggacgcgatcaacgaggcgctgcgcgactgggtgaccaacgtcagggacacg
cactacctgctcggcaccgtcgccggcccgcatccgttcccggagatggtgcgcgacttc
cagaaggtcatcggcgaggaggcgaaggagcagctgcgcgactggtacggcatcgaccat
ccggacgcgatctgcgcatgcgtcggcggcggctcgaacgcgatcggcatcatgaacgcc
ttcctcgacgacccgcgcgtcaacctctacggctacgaggcgggcggcgacggccccgaa
tcgggacgccacgctatccgcttcgccccgggcaccggagagctcggcatgttccagggc
gcgaagagctatctgctcgagaacgacgagggccagacgctcgacacctattcgatctcg
gcgggcctcgactacgcgtcggtcggccccgagcacgcctggctcaaggagatcggccgc
gtcaactactcgtgggcgaccgacggtgaggcgatgagcgcgttcaaggacctgtgcgag
accgagggcatcatcccggcgatcgagtcctcccatgcggtcgccggcgcctacaaggcg
gcggccgacctcaagacgaggggctacgagcacccggtcatgatcatcaacatctccggc
cgcggcgacaaggacatgaacaccgcgggcaaatggttcggctatctgaccgacgagcag
agcaaggcactcgaagcgaatggagcacagggtaacaatgcgtga
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