Bifidobacterium choerinum: BcFMB_07840
Help
Entry
BcFMB_07840 CDS
T05748
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
bcho
Bifidobacterium choerinum
Pathway
bcho00500
Starch and sucrose metabolism
bcho01100
Metabolic pathways
bcho01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
BcFMB_07840
Enzymes [BR:
bcho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
BcFMB_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
GHL5
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
ATU20850
UniProt:
A0A087AEC2
LinkDB
All DBs
Position
complement(1924177..1926300)
Genome browser
AA seq
707 aa
AA seq
DB search
MYPLGASYDGAGVNFALFSRMAEKVELCLFDEQDNETRVELTEQNSFVWHIYIPGIQPGQ
RYGYRVYGPYNPHNGEWCNPNKLLLDPYAKATEGNIDGDESLYSYWFNDADNPDDMNDLD
SAGHTMKSVVINPFFDWDNDQRPNISYSDSVIYEAHVRGMTNLNKNVPPEIRGTYAGLAH
PVVIDYLKKLGVTAIELMPIHQFINDPFLQEKGLGNYWGYNTIGFFAPHNAYSSQGQRGE
QVNEFRSMVKAFHAAGIEVILDVVYNHTAEGNDKGPTLSFKGIDNLSYYRLVDNDNLHYF
DTTGTGNSLLMRSPHTLQLITDSLRYWVQEMHVDGFRFDLAATLARQFQEVDKLSAFFDI
VEQDPVISQVKLIAEPWDLGSGGYQVGGFPPNWSEWNGRYRDCVRDFWRSQPATLPEFAS
RIMGSSDLYQHNGRKPVASINFVTAHDGFTMNDLVSYNNKHNEANGEGNRDGENNNRSWN
CGVEGPTTIRDINELRHRQMRNMFSTLLFSQGIPMICGGDEVCRTQLGNNNGYCQDNEIS
WTHWNLKDYQRDMLGFVSKLIHLRLEHPVLHRRRFFTGREADMPAGALPQVEWFDHNGTI
MDLEAWHNAHALSIMVFLNGGDIPETDWYGNKIVDNDFILIFNAHYEPIMFTLPDEQYGR
KWKLVVDTHNPDGPELNYEAGFAITAQSRSFLLLMSDDKDDGDAIFG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgctcggagcaagctacgatggagcgggagtcaatttcgcactgttctcaagg
atggccgagaaggtggaactgtgtctgttcgacgagcaggacaacgagacccgcgtcgag
ctgaccgagcagaactcgttcgtatggcatatctacatccccggcatccagcccggccaa
cgctacggctaccgcgtctacgggccgtacaatccacacaacggcgagtggtgcaatccg
aacaagctgctgctcgacccctacgcgaaggcgaccgaaggcaacatcgacggcgatgag
agcctctactcctactggttcaacgacgccgacaacccggacgacatgaacgacctcgac
tcggcggggcacacgatgaagtcggtcgtcatcaacccgttcttcgactgggacaacgac
cagcgcccgaacatctcgtattcggactcggtcatctacgaggcgcatgtgcgcggcatg
acgaacctcaacaagaacgtgccgccggagatccgcggcacctacgccggactggcgcac
cccgtcgtcatcgactacctcaagaagctcggcgtcacggcgatcgagctgatgccgatc
caccagttcatcaacgacccgttcctgcaggagaaggggctgggtaactactgggggtac
aacacgatcggcttcttcgcgccgcacaacgcctactcgagccaagggcagcgcggcgag
caggtcaacgagttccgctcgatggtcaaggcgttccacgctgccggcatcgaggtcatc
ctcgacgtcgtctacaaccacaccgccgaaggcaacgacaagggcccgacgctgagcttc
aaaggcatcgacaacctgtcctactaccgtctcgtcgacaacgacaacctgcactacttc
gacacgaccggcacaggcaactcgctgctgatgcgctccccgcacacgctgcagctcatc
accgactcgctgcgctactgggtgcaggagatgcacgtcgacggattccgcttcgatctg
gcggcgacgctcgccaggcagttccaggaggtcgacaagctgtcggcgtttttcgacatc
gtcgagcaggatccggtcatctcccaggtcaagctcatcgccgagccgtgggatctgggc
tccggcggctaccaggtcggcggcttcccgccgaactggtcggaatggaacggccgctac
cgcgactgcgtgcgtgatttctggaggtcgcagccggcgacgctgcccgagttcgccagc
cgcatcatgggcagctccgacctctaccagcacaacggccgcaagccggtggcgtcgatc
aacttcgtgacggcgcacgacggcttcacgatgaacgacctcgtcagctacaacaacaag
cacaacgaggcgaacggcgagggcaaccgcgacggcgagaacaacaaccgctcgtggaac
tgcggcgtcgaggggcccacgacaatccgcgacatcaacgagctgcgccaccgccagatg
cgcaacatgttctcgacgctgctgttcagccaaggcatcccgatgatctgcggcggcgac
gaggtctgccgcacgcagctgggcaacaacaacggctactgccaagacaacgagatctcg
tggacgcattggaacctcaaggactaccagcgcgacatgctcggcttcgtctcgaagctc
atccatctgcgcctcgagcatccggtgctgcaccggcgccgcttcttcaccggccgcgag
gcggacatgccggccggcgcactgccgcaggtcgaatggtttgaccacaacggcacgatc
atggacctcgaggcgtggcataacgcgcacgcgctgtccatcatggtgttcctcaacggc
ggcgacatcccggagaccgactggtacggcaacaagatcgtcgacaacgacttcatcctc
atcttcaacgcccactacgagccgatcatgttcacgctgccggacgaacagtacgggcgc
aaatggaagctcgtcgtcgacacgcacaatccggacgggccggaactcaactacgaggcc
ggcttcgcgatcaccgcgcagtcgcgcagcttcctgctgctcatgagcgacgacaaggat
gacggcgacgccatcttcggctag
DBGET
integrated database retrieval system
