Bifidobacterium choerinum: BcFMB_08490 Help Entry BcFMB_08490       CDS       T05748                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism bcho  Bifidobacterium choerinum Brite KEGG Orthology (KO) [BR:bcho00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bcho03400]     BcFMB_08490 Enzymes [BR:bcho01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BcFMB_08490     5.6.2.6  RNA 3'-5' helicase      BcFMB_08490 DNA repair and recombination proteins [BR:bcho03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     BcFMB_08490 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 PhoH Motif Other DBs NCBI-ProteinID:  ATU20948 UniProt:  A0A2D3D750 LinkDB All DBs Position complement(2078576..2083306) Genome browser AA seq 1576 aa AA seqDB search MVEYMASFSEPTRRWFTRVFGAPTEAQTLAWPAIAGGGDVLVIAPTGSGKTLAAFLAAID RIIAGMVAREGTPPHGESAAKPAGRRGKAKRGVRILYISPLKALGVDVAKNLEAPLDGIR GEYRDMGLAVPQVSVAMRSGDTTAKERRAIAAHPPDILVTTPESLYLMLTSKARSVLDTV DTVILDEVHALAGTKRGAHLALSLERLDARLARPAQRIGLSATVNPAEQAARFLGGARDV TIVQAQGRPRLDIRIADPGAALGAARGQGTASSGISASEGSGLATPERITGVTPAMERAA RRRGDGAAPPRPGGGTAGGGEPNASIWPYIESSVLDEVLAHRTTLVFVNSRGLAERLTAR LNDLYAARRGRTRDEGSEPAHYNSLIGSTTKLVGAVDPDDAIAMAHHGSVSKDRRKQIET QLKQGRLRCVVATSSLELGIDMGSVDLVIQITPPLSISSGLQRVGRADHHVGGVSHAIMY PCTRQQIVAAAASAEHMLAGAIEPLHVPQCPLDVLAQQTVAAASLEPLDADRWFEVVRRA APWRTLERDVYDAVVGMVSGAYDGEEFSAFRPALTYDAQTHMLAARPGAQRLAVTSGGTI PDRGMYTVVLPEAEAGRGPRRVGELDEEMVYESRVGDVITLGTTSWQIQQITNDRVVVLP APGRSARLPFWHGEGDGRDYGFGLAIGRWVREVGAGLVEASRAEADGAGAPEAVAKPRFT PEVRARLAGDGLDDDAIDAAAAFLAEQRAATGVIPDATHIVIERCRDEEGDWRILVHAPF GRRVHEPWALAVNARLLRRYGVDGQIYAADDGLVIRLPDGDGSIDVASLLAFDADDVARL VETQVTGSVLFAARFRECAARALFMPRADPSRRVPLWQQRLRAAQLLTAARTHRNFPLLL ETARECLQDVYDVPALREVLTGLAEGRISMHETVTSTPSPMAEQLLFGFVGSVMYQYDVP QAERDARLLSMDPEVLERLLGSDDLASVLDDAVIDEVAAALAKRTFWNALADDDVRGRVH RYLSTHGPFTADMMIADLRLPAEACVDELNALQAADEALTGRFDDRLPADVPQWVALDVL KRIRSRSLAKARKAVKPVAAADFQRFVLERQGVGSAGGQRFDGVDGVMRVVEQLEGVALP IDVWERAVFPARVRDYAPSMLDELVAAGEVVWVGAVGASSSSASSSADGLGAVMLFPFDS AQLEGRCASDAAQDGRSAPADGDMGPLGVGDAIVAALGDGGAYGPLPLEERAHACWERAS AARGLEPSVDETTGEVVAAAWSHQGFEDALWALARRGRVTNSSFPVARAAATRGAAHAPA RPVRRRRMRAHMARPAMNGGLWSLVRAGGEPCTPEERVIDLIDVLLDRYGVITQPVVDHE GVPGGFSGLYPVLRRMEEQGALMRGMFVDGFGAAQFARRETVDMMRDLIGRSPATVALDA ADPAVLYGTAIRWPGPMRMAGTQDADGADDADDADDAARTGGVKPTRRAGSLVVLRGGDA LLYAAPRSGRLVMFDEPMSLAERACTALADMLRHLPGGSVTFRDCNGVPLTARLPVTPAL RAAGFAPSPQGMKLYR NT seq 4731 nt NT seq  +upstreamnt  +downstreamnt atggtcgaatacatggcatccttcagcgaaccgacgcggcgatggttcacacgcgtcttc ggagcgcccaccgaggcgcagacgctcgcatggccggcgatcgccggcggcggcgacgtg ctcgtcatcgcgccgaccggctcgggcaagacgctcgcggccttcctcgcggcgatcgac cgcatcatcgccggcatggtggcacgggagggaacgcctccgcacggtgaatcggcggcg aaaccggcggggcgccggggcaaggcgaagcggggcgtgcgcatcctgtacatctcgccg ctcaaagcgctcggcgtggacgtggcgaagaacctcgaggcgccgctcgacggcatccgc ggcgaataccgcgacatggggctggccgtgccgcaggtctctgtcgcgatgcgcagcggc gacacgacggccaaggagcgccgcgcgatcgcggcgcacccgccggacatcctcgtgacg acgccggagtcgctgtatctgatgctcacgtcgaaggcgcgcagcgtgctcgacacggtg gacaccgtcatcctcgacgaagtgcacgcgctcgccggcacgaaacgcggcgcgcatctg gcgctgagcctcgagcggctcgacgcgcggctcgcacgtcccgcgcagcgcatcgggctg tcggcgaccgtcaatccggccgaacaggcggcgcgtttcctcggcggcgcacgcgacgtg acgatcgtgcaggcgcagggccgtccgcgtctcgacatccggatcgccgacccgggcgcc gcgctcggcgccgcacgggggcaaggtacggcttcgtcgggcatatcggcttcggaagga tcggggcttgcgacaccggagcgcatcaccggcgtcacgccggcgatggaacgcgcggcg cgccggcgcggcgatggcgctgcgccgccgcggccgggcggcggaacagccggcggcggc gagccgaacgcctccatctggccgtacatcgaatccagcgtgctcgacgaggtcctcgcg caccgcacgacgctcgtcttcgtcaactcgcgcggactggccgaacgcctcaccgcgcgg ctcaacgacctgtacgcggcacgccgcggcaggacgcgcgacgaggggagcgaaccggcg cactacaattcgctgatcggttcgacgacgaagctcgtcggtgccgtcgaccccgacgac gcgatcgcgatggcgcaccacggatcggtctcgaaggaccgccgcaagcagatcgagacg cagctcaagcaggggcgtctgcgctgcgtcgtcgcgacgagcagcctcgaactgggcatc gacatgggctcggtcgacctcgtcatccagattacgccgccgctgtcgatctcctcgggg ctgcagcgcgtcggccgcgccgaccaccacgtcggcggcgtctcccacgcgatcatgtac ccgtgcacgcgccagcagatcgtcgcggcggccgcgagcgccgaacacatgctcgccggc gcgatcgagccgctgcacgtgccgcagtgcccgctcgacgtgctcgcgcagcagacggtg gccgccgcgagcctcgaaccgctcgacgcggaccgctggttcgaagtggtgcgccgcgcc gcgccgtggcgcacgctcgaacgcgacgtctacgacgccgtcgtcggcatggtctcgggc gcctacgacggcgaggagttctcggcgttccgaccggcgctgacctacgacgcgcagacg catatgctcgccgcgcgccccggcgcgcagcgcctcgccgtgacgagcggcggcacgatc cccgaccgcggcatgtacacggtcgtgctgcccgaggccgaggccggccgcggaccaaga cgcgtcggcgagctcgacgaggagatggtctacgagtcgcgcgtcggcgacgtcatcacg ctgggcacgacgtcatggcagatccagcagatcacgaacgaccgcgtcgtcgtgctgccg gcgccgggacgcagcgcgcgcctgccgttctggcacggcgagggcgacggcagggactac ggcttcggactggcgattggacggtgggtgcgcgaggtgggcgcgggcctcgtcgaggcc tcgcgcgcggaggcggacggcgccggcgcccccgaggccgtcgcgaagccgcgcttcacg cccgaggtgcgcgccaggctcgccggcgacggcctcgacgacgacgccatcgacgcggcc gccgccttcctcgccgagcagcgggccgcgaccggcgtcatccccgacgccacgcacatc gtcatcgaacgctgccgcgacgaggagggcgactggcgcatcctcgtgcatgcgcccttc ggacgcagggtacatgagccgtgggcgctcgcggtcaacgcgcggctgctgcggcgctac ggcgtcgacggacagatctacgcggccgacgacggcctcgtcatccgtctgcccgacggc gacggctcgatcgacgtcgcctcgctcctcgccttcgacgccgacgacgtcgcgcgcctt gtggagacgcaggtcaccggcagcgtgctgttcgcggcgcggttccgcgaatgcgcggcg cgcgcgctgttcatgccgcgcgccgacccgtccagacgcgtgccgctgtggcagcagcgg ttacgcgccgcgcagctgctcacggccgcgcgcacgcacaggaacttcccgctgctgctc gaaacggcccgcgaatgcctgcaggacgtctacgacgtgccggcgctgcgcgaggtgctc accggcctcgccgaaggacgcatcagcatgcacgagaccgtcacgtccacgccgtcgccg atggccgagcagctgctgttcggcttcgtcggctcggtcatgtaccagtacgacgtgccg caggcggagcgcgacgcgcggctgctgtcgatggatccggaggtgctcgaacggctgctc ggctccgacgacctcgcctcggtgctcgacgacgccgtcatcgacgaggtcgccgccgcg ctcgcgaagcggacgttctggaacgcgctcgccgacgacgacgtgcgcggccgtgtgcac cgttatctgtcgacgcacgggccgttcacggccgacatgatgatcgccgacctgcggctg ccggccgaggcctgcgtcgacgagctcaacgcgttgcaggccgccgacgaggcgctcacc ggacgcttcgacgaccgtctgcccgccgacgtgccgcaatgggtggcgctcgacgtgctc aaacgcatccgctcacgctcgctcgccaaggcgcgcaaggccgtcaagccggtcgccgcc gccgacttccagcgcttcgtgctcgagcggcagggcgtcggctcggccggcggccagcgt ttcgacggcgtcgacggcgtcatgagggtcgtcgagcagctcgagggcgtcgcgctgccg atcgacgtgtgggagcgggccgtgttcccggcgcgcgtgcgcgactatgcgccgtcgatg ctcgacgagctcgtcgccgcaggcgaggtcgtctgggtcggcgcggtcggtgcatcgtcc tcgtccgcctcatcctcggcggacggactcggggcggtcatgctgttccccttcgattcg gcgcagcttgagggacgatgcgcatccgacgccgcgcaggacggccgctcggcgccggcg gacggcgacatggggccgctcggcgtcggcgacgcgatcgtcgccgcgctcggggatggc ggcgcctatggtccgctgccgctcgaggaacgcgcccacgcatgctgggagcgcgcgtcg gcggcccgcggcctcgagccgtccgtcgacgagacgaccggcgaggtcgtcgccgcggca tggagccatcagggcttcgaggacgcattgtgggcgctcgcccggcgcggccgcgtcacg aactcgtcgttcccggtggcgcgcgcggcggcgacgcggggcgcggcgcacgcgcctgca cgccccgtgcgccgacggcgcatgcgcgcgcacatggcacggccggccatgaacggcggc ctgtggtcgcttgtgcgcgcgggcggcgaaccgtgcacgccggaggaacgcgtcatcgac ctgatcgacgtgctgctcgaccgctacggcgtgatcacgcagccggtcgtcgaccatgag ggcgtccccggcggcttctcgggcctgtacccggtgctgcggcgcatggaggagcagggc gcgctgatgcgcggcatgttcgtcgacggcttcggcgcggcgcagttcgcgcggcgcgag accgtcgacatgatgcgcgacctgatcgggcggtcgccggccacggtcgctctcgacgcc gccgatccggccgtcctctacggcacggcgatccgctggcccgggccgatgcggatggcc gggacgcaggacgcggacggcgccgacgacgcggacgacgcggacgacgcggcgcgtacg ggcggcgtcaagccgacgcgtcgcgccgggtcgctcgtcgtgctgcgcggcggcgacgca ctgctgtacgcggcgccgcgctcgggacgcctcgtcatgttcgacgaaccgatgagcctc gccgaacgcgcatgcacggcgctcgccgacatgctgcggcacctgccgggagggtcggtc acgttccgcgactgcaacggcgtgccgctcacggcgcgcctgccggtcacaccggcgttg cgcgccgccggattcgcgccgtccccgcagggcatgaagctctaccggtga

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