Bifidobacterium choerinum: BcFMB_08835
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Entry
BcFMB_08835 CDS
T05748
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
bcho
Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:
bcho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bcho03036
]
BcFMB_08835
Chromosome and associated proteins [BR:
bcho03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BcFMB_08835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
TGT_C1
Motif
Other DBs
NCBI-ProteinID:
ATU21005
UniProt:
A0A087AB25
LinkDB
All DBs
Position
complement(2165246..2166169)
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AA seq
307 aa
AA seq
DB search
MANGLRMAESKFLAYIDVERGLAKATVEAYERDLDRYLQWLDARGIDDARAITPLHVEAF
IQSLAIDGQSATSRARHLASVHMFHRFMLGEHLVDDDVSQQVKAPKAGSALPDVLDVDEV
AALLKAARPEGTDDAAGLRDDALLEFMYATGCRVSEAVGTNLDDFDFDEQVVRLTGKGDK
QRLVPFGDYARDALDAYLRYGRTPLQEKAKGAPELRAVFLNLRGRRLSRQSVWEIIRRAG
ERAHITRSLHPHTLRHSFATHLIQGGADVRTVQELLGHASVKTTQIYTHISPEALIETYI
TAHPRAK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgggctgcggatggcggagtcgaagttcctcgcgtacatcgacgtcgaacgc
ggattggcgaaggcgaccgtcgaagcgtacgaacgtgacctcgaccgctatctgcagtgg
ctcgacgcgcgcggcatcgacgacgcgcgcgcgatcacgccgctgcacgtcgaggccttc
atccagtcgctcgcgatcgacgggcagagcgcgacgagccgcgcgcggcatctcgcgagc
gtgcacatgttccaccgcttcatgctcggcgaacatctcgtcgacgacgacgtctcgcag
caggtgaaggcgccgaaggccgggtcggcgctgccggacgtgctcgacgtcgacgaggtc
gccgcgctgctcaaggcggcgcgccccgagggcacggacgacgccgccggactgcgcgac
gacgcattgctcgagttcatgtacgcgaccggctgccgcgtcagcgaggccgtcggcacg
aacctcgacgacttcgacttcgacgagcaggtcgtgcggctgaccggtaaaggcgacaag
cagcggctcgtgcccttcggcgactacgcgcgcgacgcgttggacgcctacctcagatac
ggacgcacgccgctgcaggagaaggcgaagggcgcgccggaattgcgcgcggtcttcctc
aacctgcgcgggaggcggctgtcgcggcagtcggtgtgggagatcatccgccgcgccggc
gagcgcgcgcacatcacgcggtcgctgcacccgcacacgctgcggcattcgttcgcgacg
cacctcatccagggcggcgcggacgtgcgcaccgtgcaggagctgctcgggcacgcgtcg
gtgaagacgacgcagatctacacgcacatcagccccgaagcgctcatcgaaacgtacatc
accgctcatccacgcgccaaatag
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