Candidatus Blochmanniella chromaiodes: BCHRO640_629
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Entry
BCHRO640_629 CDS
T02430
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bchr
Candidatus Blochmanniella chromaiodes
Pathway
bchr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bchr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCHRO640_629 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchr03021
]
BCHRO640_629 (rho)
03019 Messenger RNA biogenesis [BR:
bchr03019
]
BCHRO640_629 (rho)
Transcription machinery [BR:
bchr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BCHRO640_629 (rho)
Messenger RNA biogenesis [BR:
bchr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCHRO640_629 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AGC03853
UniProt:
A0ABM5NDY9
LinkDB
All DBs
Position
complement(726399..727658)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTKLKNIPVSELVHLGESMGLENLARMRKQDIIFAIFKQHAKTGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNDVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSISHNHPDCVSIVLLIDERPEEVTEMQRLVHGEVIASTFDEPASRHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTIVPSSGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQDELQKIWILRKIIHPMSEIDAMEFMMNKLSMTKTNDEFFDMMKRC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacaaaattaaaaaacataccagtttctgaattagtacatctcggagaaagt
atgggtctagagaatttagcacgtatgcgcaagcaagatattatttttgctatttttaaa
caacatgctaaaactggagaagatatttttggggatggtgtattagaaatattacaagat
ggttttgggtttcttagatctagtgatagctcttatcttgctggaccagatgatatttat
gtgtctccaagccagattcgtcgttttaatttacgtactggagatactatttctgggaaa
attagacctccaaaagaaggtgaacgttattttgcattgcttaaagtaaatgatgtaaat
tatgataaaccagaaaatgctcgtaataaaattttgtttgaaaatcttactccattacat
gccaattcacgattacgcatggaaagaggaaatggttctacggaagacttaaccgcaaga
gtattggacctggcatcacctattgggcgcggtcagcgcggtttaattgtagcgcctcct
aaagccggcaaaaccatacttcttcaaaatattgcacaaagcattagtcataatcatcca
gactgcgtatcaatagtgctcttgatagatgaacgtccagaagaagttactgaaatgcaa
cgcttagtacacggagaagtaattgcatctacctttgatgagccagcatctcgtcatgtt
caagtatctgaaatggtaatcgagaaagctaagcgattagtagaacacaaaaaagatgta
attattttgttagattccattactcgattagcgagagcctataatactatagtaccttca
tctggaaaagtgttgacaggaggggttgatgccaatgctttacatcgtccaaaacgcttt
ttcggagcggctcgtaatatggaagaaggaggaagcttaactattatagctactgcttta
atagatactggatcaaaaatggatgaagtaatttatgaagaatttaaaggaactggcaat
atggaattgcatttgtcaagaaaaatagctgaaaagcgtgtttttccggctattgattac
aatcgttctggaactagaaaagaagaactattaactactcaagatgaactgcaaaaaata
tggattctacgaaaaattattcatccaatgagtgaaattgatgcaatggaattcatgatg
aataaattatctatgactaaaaccaatgatgaattttttgatatgatgaagcgttgttaa
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