Brevibacillus choshinensis: JNE38_05555
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Entry
JNE38_05555 CDS
T07271
Name
(GenBank) S-layer homology domain-containing protein
Organism
bchs
Brevibacillus choshinensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Big_9
Bact_surface_Ig-like
Cadherin_5
Cadherin-like
Cadherin_4
CBM96
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
QRG68618
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Position
1021679..1026532
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AA seq
1617 aa
AA seq
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MKQTATILALTSFLFFAPQLIMENRADAAGTTATLKKDGTWTNDGIWMDEPENYVGKAPA
PMDYYRSAIQFELPDLQGKTVTKATLRIKIANIQSSYPSLTPFLTVYGSSVDTWGVDFPL
AVTDEEIKTIEVAGTDAGNWLEFDVTDFVVKQTDGIASFALRANEQFGGAGDELDIIYYA
DDSLYSAYHPQLILETGTPTLASKPPVVANATTSEDTPVSGLVINKDPQDETAVTHFKIS
NITGGRLYQQDGMTEITNGTFISTNEGSNGLNFVPSANANFPAGDTFSFQAQAAQSGSGN
GLSTVAEPLIMVTEVNDPPVAGDDALGDIKEDASPLIIPIADLLANDSPGPANEAGQALK
LTMEPNNSVTGGELSIDGANLVFTPKPNYWGNAGFTYTITDNGTTNGLPSPETAEGTVAF
YIQPVADIPNVTDATTAEDTQTSDGLQISKNEVDGPEVTYYKVSNIRGGTLFKNDGVTPI
LDGEFTPASEGAKGLKFTPGPDSNTQAGDIFSFQVQAALDLGGTGLSDSATATITVNEVN
DRPVAEPDTLEPIAENSGERMIPISKLTENDKTGPSNESDQIPTVIAVEEITGGAVRLDV
DTQQVIFTPSLNFRGEASFRYTVQDDFGLTSSAIVTFQIMARTDPPNVSPAETPEDTMTG
DGLVITKTDVGGSTTTHFKISGITGGKLYHSNGSTKIEDGEFITVSEGGAGLRFKPADDQ
HGDSGFGFVVQAAADANGSLLSDAVTATIRVTEVNDTPVGLDDELGNFEKGSTLISIPLS
KLIENDIPGPPDEHWQTLNVIDVTPMVGDTATLDQDHITYRLNPSHSETVTFSYTVIDDG
ITNNISDPKTVTAKAIFHLTDSTPPIITLNGDQTLYVLQNESYAEPGYSANDEIDGDLTD
EVVAEGEVDTHVLGIYTIRYNVKDGSGNDAAEVTRTVHVVSNKLGDLSVSSYQLTPSFDP
DQNSYSLESNDKTVTIEATTLDTTATLTINGFVKGNGGQQAVNLENGKNEITIVVTAKGG
ATQPYELEITFLPPVTPDPGPEPDPQPNPDPGPEPDPQPNPDPGPEPDPQPNPDPGPEPD
PQPNPDPGPEPDPQPNPDPGPEPDPQPNPDPGPEPDPQPNPDPGPEPDPQPNPDPGPEPD
PQPNPDPKPTPTPRPDRDRNRDSKSGNNQDTKKETRQARVISDDQRDKAAVKVDIERSIE
RNGKIIDSVSLSGAKVEELLSGNKANSMKFARIEVDEIKDQPAEEVLINVSGSALHKLNE
ARLDLIIEVSGAKITLSQDTLNQFNDNQNLYFRVVPIHKNDESLQVKEKVNGAQEVQAFA
NGRNVRAVGQPMTIETNYTHHKTKVSFPLEGIDISDDPQQRQSFLDGLAVFIEHSDRDKE
VKTGKIEYDESGHPIGIEIEVQMFSTFTIISTESDFKSYKRYISGFPDGAFHPSDNITRA
ELASLIARHMGLVQDKGANPYPDLHATHWAANSVLQLSAAGILSGDLTGYFRPEQGVTRA
EMASVAYKVKGLEPAKLENTFSDTQGHWASNIIEAVQKAGLMRGYEDGTFRPNQRLTRAE
AITILNRLFARPALSIMQGTHWSDVAQSHWAAGDIESASRDLRLYQDGRIEFADLHE
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagaccgcgaccattttagctttgacttcctttctattttttgccccacaatta
attatggaaaatcgggcagatgcagccggtaccactgcaaccctcaaaaaagacggtacc
tggactaatgatggtatttggatggatgaaccagagaattacgtgggtaaagctcctgcc
cccatggactactatcgttctgcgatccaattcgagctgcctgacttgcaagggaaaacc
gtcacaaaagcaacgttgcgaataaaaattgctaacattcagagttcctatccaagcctg
acaccttttctaactgtatatggttcctctgtcgacacatggggcgttgattttccgttg
gcggttactgatgaggaaatcaaaaccatagaggtggcaggtaccgacgcaggaaattgg
ctcgagtttgatgtcactgattttgtagtcaagcagacggatgggattgcatctttcgcc
ttacgtgcaaatgagcagtttggaggagcaggagatgaactggatataatctattacgct
gatgattctctatattccgcgtaccatccacaactaatcctggaaaccggaacaccaact
ctcgcatccaaaccaccggtagtggcaaacgcaaccacttcggaagacactcctgtatca
ggtttggtgatcaataaggacccgcaagatgagactgccgtgactcatttcaaaatttcc
aacattacaggggggaggctctatcagcaagatggcatgaccgaaatcacaaacggtaca
tttatctctaccaatgaagggagcaacggtcttaatttcgttccatcggcaaatgccaat
tttcctgctggagatacgttttcattccaggcgcaagctgctcaaagtggatcagggaat
ggattaagcacagttgcagagccccttatcatggtcacagaagtaaacgatcctcccgtt
gctggcgacgatgcgttaggcgatatcaaggaggatgcatcgccccttatcattccgatt
gctgatctgcttgcaaacgattcgccgggaccagccaacgaagccggacaagcactgaaa
ctgacaatggaaccgaacaactcggtgacaggcggagaactttcaatcgacggagctaat
ctggtctttacccctaagccgaactactggggaaatgctggctttacctatacaataaca
gataacggaacgaccaatggcctcccttcccctgagaccgctgaaggaaccgtcgctttt
tatatccagccggtggctgacatcccgaacgtcacggatgcaacgacagcagaagacacc
cagacctcagatggacttcagatttccaaaaacgaagtggatggaccagaagtgacctac
tacaaagttagtaacattcggggcggcacgctcttcaaaaatgacggcgttacccccatc
ctcgacggtgaattcactcccgcaagcgaaggagcaaaaggactcaagtttacaccaggc
ccggattccaatacacaggctggagacatcttttcgtttcaggtccaagcagcactcgac
ctaggcggtactgggctaagcgattcagccacggcgacgataaccgtaaacgaagtaaat
gaccggcccgtagccgaacccgatacgcttgaacctattgctgaaaattccggtgagcgg
atgatccccatttccaagttgaccgaaaacgacaaaacaggtccaagcaacgaatccgat
cagataccgaccgttatcgctgtagaagagatcacgggcggagcagtacgattggatgtc
gatacccaacaggtgatttttaccccatcattgaattttcgaggtgaagccagcttccgt
tatacggtgcaagatgactttggattgaccagcagcgcaatcgtcaccttccagatcatg
gctcgtaccgatcctccgaacgtgtcacctgcagagaccccggaggatacaatgaccggg
gacggacttgtcatcacgaaaacggatgtcggcgggtcaaccaccacgcattttaaaatt
agcggtattactggcggtaagctctaccactctaacggcagcaccaagattgaagacgga
gagtttatcacggtttccgaaggtggtgcaggattgagattcaaacctgccgacgatcag
catggagatagcgggtttggttttgttgtacaagctgctgctgatgccaacggttcgcta
ttaagtgatgcggtaacagctacgataagggttaccgaagtcaatgacacaccggttggg
ctcgatgatgaattaggtaattttgaaaagggatcgactttaataagcattccgttatcc
aaattgatagaaaacgacattcccggaccgcctgatgaacattggcagaccctaaacgtt
atagatgtcacccctatggtcggagacactgcaacacttgatcaggaccatatcacttat
cgcctaaacccgagccattctgaaacagtgacattctcttacacggttatcgatgacggg
atcacgaataatatttccgatccaaaaactgttactgctaaagcaatttttcatttgaca
gattcgactccgccgatcattaccctgaatggcgaccagacgttgtatgtattacaaaat
gagtcatatgcagagccgggatattccgccaacgatgaaatcgatggggatttgacggat
gaggtggtagcagaaggagaggtagatactcatgtgcttggtatctataccatccggtat
aacgtgaaagacggaagtggcaacgatgcagcggaagtaacgcgaaccgttcacgttgtt
tccaacaagctgggggatttgtctgtttcctcataccaattgacaccctcgtttgatcct
gaccagaattcttactcgcttgaaagcaatgataaaactgtaacgattgaagcgacgact
cttgatacgacggcaacactcacgattaatggctttgtgaagggaaatggcggacaacaa
gcggtcaatttggaaaacggaaaaaatgagatcacgattgtcgtcactgcaaagggtggg
gcaactcaaccctatgagttggaaatcaccttcctcccccctgtgactcctgatccaggg
ccagagccagatccgcagccaaatcctgatccagggccagagcccgacccgcagccgaat
cctgatccagggccagagccagacccgcagccgaatcctgatccagggccagagccagat
ccgcagccaaatcctgatccagggccagagccagacccgcagccgaatcctgatccagga
ccagagccagacccgcagccgaatcctgatccaggaccagagccagatccgcagccaaat
cctgatccagggccagagcccgacccgcagccgaatcctgatccagggccagagccagac
ccgcagccgaatcctgatccgaagcctacaccgacgcctcgacctgatcgggatcgcaac
agagattctaagagcgggaataatcaagatacgaaaaaagaaacccgacaagccagagtc
atctcggacgatcaacgtgacaaagctgctgtcaaagtggacattgaacggagcatcgag
agaaatggcaagattatcgactctgtctcgttgagcggagcaaaagtcgaggaattgtta
tccggaaataaagctaattctatgaaatttgcacgaatcgaggtcgatgagatcaaggat
cagcctgctgaagaagtgctcatcaacgtatcggggtcggccctgcacaagctgaacgaa
gctaggcttgacctgatcatcgaggttagcggtgcaaaaattacactgtcccaagacacc
ttgaaccaatttaacgataatcaaaatctttacttccgggttgtcccgattcacaagaat
gacgaatcactgcaagtgaaagaaaaggtgaacggggcccaagaagtccaagcatttgca
aatggcaggaacgttcgtgctgttggtcagcccatgacgattgaaaccaactacacgcat
cacaaaacgaaggtatcgttccctcttgaagggattgacatctcagatgatccacagcag
cgacaatcgtttctcgatggattagccgtgttcatagaacacagtgatagagataaagaa
gtcaaaacgggaaaaatagaatacgatgaaagtggccatcccattggcatcgaaattgag
gtacagatgtttagtacattcacgatcatctcaaccgaatctgacttcaagtcgtacaaa
cgatacatctctggctttcctgacggtgctttccacccatccgacaacatcacccgtgca
gaattggcatcgctcattgcccgtcacatggggcttgtccaagataagggagcaaatcct
tatccagacttgcatgcaacccactgggccgccaattccgtactgcaattgtcagcagca
ggtattctctctggtgatctaacaggctatttccgtcccgaacaaggagtaacccgagcg
gagatggcatctgttgcttataaggtaaaaggactagagcctgcgaagcttgaaaacaca
ttctctgatacgcaggggcattgggcgtcgaatattatcgaggctgtacaaaaggctggt
ctaatgcgcggctatgaggatggaacattccggccgaaccagcgtttgacacgagccgag
gccatcacgattttgaatcgtctgtttgcccgtccggcactctccatcatgcaggggacc
cactggtcggatgtagcacaatctcattgggcagcaggcgatattgaatcggcctctcgt
gaccttcgtctttaccaagatgggcgaatcgagtttgccgatcttcacgaatag
DBGET
integrated database retrieval system
