Brevibacillus choshinensis: JNE38_07480
Help
Entry
JNE38_07480 CDS
T07271
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bchs
Brevibacillus choshinensis
Pathway
bchs03030
DNA replication
bchs03410
Base excision repair
bchs03420
Nucleotide excision repair
bchs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNE38_07480 (polA)
03410 Base excision repair
JNE38_07480 (polA)
03420 Nucleotide excision repair
JNE38_07480 (polA)
03440 Homologous recombination
JNE38_07480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bchs03032
]
JNE38_07480 (polA)
03400 DNA repair and recombination proteins [BR:
bchs03400
]
JNE38_07480 (polA)
Enzymes [BR:
bchs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNE38_07480 (polA)
DNA replication proteins [BR:
bchs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JNE38_07480 (polA)
DNA repair and recombination proteins [BR:
bchs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JNE38_07480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNE38_07480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QRG68971
LinkDB
All DBs
Position
1421267..1423918
Genome browser
AA seq
883 aa
AA seq
DB search
MSHFVLIDGNSIANRAFYALPLLSTSAGLHTNAVLGFTTMLLKVLEEMKPTHIMVAFDAG
KVVFRHTEYADYKGGRAKTPPELSEQFPLIRELLDAFSIKRFELEGYEADDIIGTLTKTA
DEQAWKTTVITGDKDMLQLVSEHVSVALTRKGVSEIELYTPQEIQEKYGLAPLQIIDLKG
LMGDTSDNIPGVPGVGEKTALKLLHEYGSVEQVLENIDRVSGKKLQENLRENVDKAKMSK
DLATILREAPVELDVQETGYSGYDGMMLSEFFKRMEFKSLLSKIKVDAPAEGDGQAAPGA
PFEFEVLSEDNVDQFAEKLTSPMAVYVEMDGDNYHHAPIVGFGLSAEGVNLYVPWDVAKG
WNAFCEWLADGSQEKWVFDGKRDTVGLEWHERAIQGIGFDVYLASYLLNATESNPTLDSI
ASQYAKVRVRSDEEVYGKGAKRLLPEVDVLSEHVAHKSAAIWQSVPVLREQLAENQMNEL
LFDLEAPLSMVLALMERQGIKVNRDRLAQMGIELDAKLEDLTKQIYELAGTTFNINSPKQ
LGEILFDVLDLPVLKKTKTGPSTSADVLEKLAPYHPIIDAILTFRQLGKLRSTYIEGLTK
EIHEKSSKVHTLYNQATTATGRLSSTEPNLQNIPIRMEEGRKIREAFIPSEDGWYMLAAD
YSQIELRILAHISGDENLIDAFRNGMDIHTRTAMDVFGVGEDEVTSLMRRQAKAVNFGIV
YGISDYGLSQNLNITRKEAGEFIERYFSVFSGVKQWMEDIVKEAKQDGYVTTLLNRRRYL
PDIRSSNFNLRSFAERTAMNTPIQGTAADVIKLAMIRMQETLQEKGLKSRMLLQVHDELV
FEVPQDELEMMKQLVPQVMESALELQVPLKADVNFGHSWYDAK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
ttgagccattttgtgttgattgatgggaacagtatcgccaatcgtgcgttttatgcgttg
ccgcttctgtccacgtcggcaggattgcataccaatgctgtgttgggattcacgaccatg
ctgctgaaggtcttggaggaaatgaaaccgactcatatcatggttgcgtttgatgcgggc
aaagtggtgttccgccataccgaatatgccgattataaagggggaagggcaaaaacgccg
ccggagctgtccgagcagtttcctctgatacgcgagctgctggacgccttctccatcaag
cgctttgagctggaaggctatgaggcagatgacattatcggcaccttgaccaaaacggca
gatgagcaggcctggaaaacgaccgtcattacaggtgacaaggatatgctccagctcgta
tcggagcatgtatccgtggcattgacacgcaagggtgtcagtgagatcgagctgtacacc
ccgcaggaaattcaggaaaagtacggactcgctccgctgcaaattatagatctcaaaggg
ctgatgggagatacgtcggacaatatcccgggtgttccgggagtcggtgaaaagacagcc
ctcaagctgctgcacgagtacggctctgtggagcaagttttggagaacattgatcgggtg
tccggcaaaaagctgcaggaaaatctgcgcgagaatgtggataaggccaagatgagcaaa
gatttggccaccattttgcgagaagcgcctgttgagttggatgtgcaggaaaccgggtat
tccggttatgacggcatgatgctgagcgagttctttaaaaggatggaattcaagtccttg
ctctccaaaatcaaagtggacgcgccggcagagggtgacggacaggctgcccctggggct
ccgttcgaatttgaggtcctgtccgaagacaatgtcgatcaatttgcggaaaagctgacc
tcaccgatggcagtctacgtggagatggatggagacaactaccaccatgctccgatcgtt
ggcttcgggctgtcagcagaaggcgtaaatctgtacgttccatgggatgtggcaaaaggc
tggaatgcgttttgcgagtggcttgcagatggttctcaggaaaaatgggtgtttgatggc
aagcgagacacagttggactggagtggcatgagcgcgctatccagggcatcggtttcgac
gtctatttggcatcttatttgctgaatgcgaccgaaagcaatccgacgctggattcgatc
gcgtcacagtacgccaaggtgcgtgtgcgctcggacgaagaggtatacggaaaaggggca
aaacggcttttgccggaagtcgatgtactcagtgagcatgtcgcccataaatctgctgcc
atctggcaaagcgtcccggtattgcgcgagcagctggcggaaaaccagatgaatgagctg
ctctttgatctcgaggcgccgctcagcatggttctcgctctgatggaaagacaagggatc
aaggtaaaccgcgatcgcctcgcccaaatgggaatcgagctggatgccaagctggaggat
ctgacgaagcagatctacgagctggcgggaacgacctttaatatcaactcgccgaagcag
ctgggcgagatcctgtttgatgtactcgaccttcctgttttgaaaaagaccaagacgggg
ccgtccaccagcgctgatgttctggagaagctggcaccgtaccatccgatcatcgatgcg
atcttgacgttccgccagctgggcaagctgcggtctacctatatcgagggcctgaccaag
gagattcacgagaaatcaagcaaagtgcacacgctgtacaatcaggcgacgacggcgacc
gggcgtttgtccagcaccgagcccaatctgcagaacatcccgatccggatggaggagggg
cgcaaaattcgcgaagcctttatcccatccgaggatggctggtacatgctggcggcggac
tactcccagatcgagctgcgcattctcgcgcacatatcgggtgacgaaaacctgattgac
gccttccgcaacgggatggacatccacacgcgcacagccatggacgtatttggtgtgggc
gaggatgaagtgacttccttgatgcgccgtcaggccaaggcggtcaacttcgggatcgtg
tacggaatcagtgactacggactgtcgcagaacctgaatattacccgtaaagaagcggga
gaattcatcgaacgttacttctccgtgttttcgggggtcaagcaatggatggaggacatc
gtcaaagaggccaagcaggacggctatgtgacgacgcttctgaaccgccgccgttacctg
cctgacattcgcagcagcaacttcaacctgcgatcctttgcagagcgtacggcaatgaac
acgccaattcaggggacggcagctgacgtgatcaagctggcgatgatccgcatgcaggaa
acgctgcaggaaaagggattgaaaagccgcatgctgctgcaggtgcacgatgaattggtg
ttcgaggtgccgcaggacgagctggaaatgatgaaacagctggtgccgcaggtcatggag
agcgcacttgagctgcaggtgccgctgaaggcagacgtgaacttcggacacagctggtac
gatgcaaaatag
DBGET
integrated database retrieval system
