Brevibacillus choshinensis: JNE38_10895
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Entry
JNE38_10895 CDS
T07271
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bchs
Brevibacillus choshinensis
Pathway
bchs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JNE38_10895 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchs03021
]
JNE38_10895 (rpoD)
Transcription machinery [BR:
bchs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JNE38_10895 (rpoD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
QRG69583
UniProt:
A0ABX7FTL7
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All DBs
Position
2130757..2131887
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AA seq
376 aa
AA seq
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MNKQNITSDMEAMSIEQVKEQLVELGKKRGALSYKEITDRLSGFEQDSDQIDEFFEYLGD
QGIEINNNENEDDDEEVDRMIMKDEDNEEFDFDDLSVPPGIKINDPVRMYLKEIGRVPLL
SAEEEIKLAQRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAV
EKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGR
EPMPEEIAEKMDLTPEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQDALEPSDAAA
YELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALR
KLRHPSRSKRLKDFLE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaaaacatcacttcagacatggaagcaatgtccatcgaacaagtgaaggaa
caattggtcgaattaggcaaaaaacgcggtgcgctgtcgtacaaggaaatcaccgatcga
ctctcaggttttgaacaggattccgatcaaatcgatgagttttttgagtatctgggtgat
caaggcattgagataaacaacaacgaaaacgaggacgacgacgaagaagtagatcgaatg
atcatgaaggacgaggacaacgaagaattcgattttgacgatctctctgttccacccgga
atcaagatcaatgaccctgtaaggatgtacctgaaagaaatcggtcgtgtgcctctactt
tccgccgaagaggagattaagctggcccagcgtattgagcagggcgacgaggaagccaaa
cgccgactggcagaagccaaccttcgtctggtggtatcgattgcgaagcgttatgtaggg
cgcggcatgctgttcctcgatttgatccaagaagggaacatgggtctgatcaaagcggtt
gaaaagtttgactaccgcaaaggctacaagttcagtacgtacgccacgtggtggattcgt
caagctatcacccgcgcgatcgcagaccaggcacgtacgattcgaattcctgtgcatatg
gtggaaacgatcaacaagctcattcgggtatcgcgtcagctcctgcaagaattgggacgt
gaaccgatgccagaggaaatcgcagaaaaaatggatctcacgcctgagaaggttcgggaa
atcatgaaaattgctcaagagccggtatcattggagacgccgatcggggaagaagacgat
tcgcatctgggcgattttatcgaggaccaagacgcgttggaaccttccgatgccgcagct
tatgaattgttgaaagaacaattggaagacgtgctggatacgttgacagaccgagaagag
aacgttcttcgtctacgctttggtctcgatgacggtcgtactcgtactttggaagaagtg
ggaaaagtgtttggcgtaacgcgtgagcggattcgtcagatcgaggcaaaagcgcttcgc
aaacttcgtcatccaagcagaagcaagcgcttaaaagatttcctggaataa
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